Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03384 ATGGCTGGAACAACGGGTTACCTTGACCCAGAATATATTATCACAGGCAAGGCTAGAAAGGAATCTGACATGTTCAGCTTTGGAGTTGTTTTGTTGGAGGTAGCAAGTGGAAGAAAAGCCAATGACCCAGAAGAGAAAGAGGGTCAATCTCAAGTGTCACTAGTTAAGTGGGTGTGGGAGCTCTATAGACTTAGAAATCTCCTTGCAGCAGCAGATCCAAAGCTGAATGGGGAATTTGATGTGCAGCAAATGGAATGCTTGCTTGTTGTTGGTATTTGGTGTGCTAATTCGGATAGCAAGACAAGGCCCTCTATAAGGCAAGTGATTAAGGTGCTTAAC 339 0.4395 MAGTTGYLDPEYIITGKARKESDMFSFGVVLLEVASGRKANDPEEKEGQSQVSLVKWVWELYRLRNLLAAADPKLNGEFDVQQMECLLVVGIWCANSDSKTRPSIRQVIKVLN 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03384 113 ProSiteProfiles Protein kinase domain profile. 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g03384 113 Gene3D Transferase(Phosphotransferase) domain 1 1 113 - -
Vimu11g03384 113 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 113 - -
Vimu11g03384 113 Pfam Protein tyrosine and serine/threonine kinase 7 65 IPR001245 GO:0004672|GO:0006468
Vimu11g03384 113 SUPERFAMILY Protein kinase-like (PK-like) 2 110 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03384 Vimu-Chr11 54723576 54723951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03384 1 113 Receptor kinase-like Gene Family AT5G10530 51.754 1.11e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vimu11g03384 PK_Tyr_Ser-Thr 2.6e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03384 - - vra:111241198 179.104