Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03368 ATGCACAGGGGCGCTATTGAAGTTTTAGAATTGGAATTGGTTGAAGAAATGTTGATTCTTTTTCCCCCTTTTTATGTTGTTGCAGCGAGAAAGTTGGACTTTATGAGGCCTCAGATCTGTGCACCGGGAAGGTCCCATTTCTCAACTGCTGTCGAACCATCTTCCAGTAAGAGCAATCCACCGAGGGTTCCAAATCTTATTGGGGGCAGATTTGTTGACTCAAAATCATCAACTGTCATTGATGTTATAAACCCAGCAACCCAAGAAGTTGTTTCACAAGTTCCTTTGTCTACGGATGAAGAGTTTAAGGCAGCTGTATCTGCAGCAAAGAAGGCATATCCATTATGGCGTAACACTCCAATTACAACACGCCAACGTGTTATGTTGAAGTTTCAGGAGCTTATACGCAGAGATATGGACAAACTTGCTCTTAATGTGACCACTGAGCAAGGAAAGACGTTGAAGGATGCACAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGAATGGCAACTCTACAAATGGGGGAATATGTTTCAAATGTATCACATGGAATTGATACTTACAGTATTAGAGAACCACTTGGTGTATGCGCTGGTATTTGTCCATTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCTGTGGCTGTTACCTGTGGTAACACCTTTGTTCTAAAACCATCAGAGAAAGACCCAGAATTAGCATTGGAGGCTGGTTTGCCAGAGGGTGTCTTAAATATAGTTCATGGAACCCATGTATGTGATCACCTGGATATTGTGAATTCTATTTGCGACGATGATGACATCAAAGCCATATCATTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAGTCTAACATGGGAGCAAAAAATCATGCCATTGTCTTGCCAGATGCAAATGTTGATGCTACTCTAAATGCTTTAGTTGCAGCTGGTTTTGGTGCTGCTGGTCAAAGGTGTATGGCTCTCAGCACAGTTATTTTTGTTGGAGACGCAAAATCATGGAAAGCCAAACTTGTGGAGCGTGCCAAAGCTCTCAAGGTAAATGCGGGAACTGAACCTGATACAGACCTTGGTCCAGTGATCAGCAAGCAGGCAAAGGAGAGAATACACAAACTAGTTAAATCTGGTGTTGAAAGTGGTGCCAAATTACTGCTGGATGGAAGAAATATTGTGGTTCCAGGATATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATATCACTACCAACATGGAATGCTACAAGGAGGAAATTTTTGGCCCAGTTCTCCTTTTCATGGAGGCTGATAGCTTGGAAGAGGCCATAAGCATTATCAATAGTAACAAGTATGGAAATGGTGCTTCAATATTCACCACATCTGGTGTTGCTGCAAGGAAATTTCAGACTGAGATAGAGGCAGGCCAGGTTGGCATCAATGTTCCCATTCCAGTTCCATTGCCCTTCTTCTCATTCACTGGCAACAAGGCATCTTTTGCCGGTGATCTCAACTTCTATGATAATGTTGTTTGCTGTTCACTTGTGGAACCATTTGACCCTATTTTAGAGAAAAACACTCAAAGAATAGCTTTGCAAACACTGTACTTGAAGGAAGACAAAGATGAGGAACCCAAAGAAGATTTAGAGATATTGGTTAGCTTTATTATGATGACACTTAGAAGGAAGAAAAATCCAAAATAG 1740 0.4172 MHRGAIEVLELELVEEMLILFPPFYVVAARKLDFMRPQICAPGRSHFSTAVEPSSSKSNPPRVPNLIGGRFVDSKSSTVIDVINPATQEVVSQVPLSTDEEFKAAVSAAKKAYPLWRNTPITTRQRVMLKFQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPELALEAGLPEGVLNIVHGTHVCDHLDIVNSICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVLPDANVDATLNALVAAGFGAAGQRCMALSTVIFVGDAKSWKAKLVERAKALKVNAGTEPDTDLGPVISKQAKERIHKLVKSGVESGAKLLLDGRNIVVPGYESGNFIGPTILSDITTNMECYKEEIFGPVLLFMEADSLEEAISIINSNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYDNVVCCSLVEPFDPILEKNTQRIALQTLYLKEDKDEEPKEDLEILVSFIMMTLRRKKNPK 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03368 579 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 506 IPR016163 GO:0016620
Vimu11g03368 579 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 29 521 IPR010061 GO:0004491
Vimu11g03368 579 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 306 506 - -
Vimu11g03368 579 SUPERFAMILY ALDH-like 58 516 IPR016161 GO:0016491
Vimu11g03368 579 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 65 521 IPR010061 GO:0004491
Vimu11g03368 579 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 67 312 - -
Vimu11g03368 579 CDD ALDH_F6_MMSDH 63 519 IPR010061 GO:0004491
Vimu11g03368 579 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 331 342 IPR016160 GO:0016491
Vimu11g03368 579 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 67 514 IPR016162 GO:0016491
Vimu11g03368 579 Pfam Aldehyde dehydrogenase family 71 516 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03368 Vimu-Chr11 54487438 54496091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03368 27 526 Aldehyde Dehydrogenase Gene Family AT2G14170 78.107 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03368 K00140 - gmx:100811544 894.419