Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03319 ATGGTGAAATCAGAGATGGCAGAGAGTGAAGTGGAGGTGATTCACTCATGGACTGCTCCAAGATCCCTCAGTACCAGTCTCATGTATTCTTTTGCTCAGAGGGATGACATAGAAGTGCTTGATGAGCCTCTCTATGCATATTTCCTTAAAGTAACAGGTCTTGATAGACCATACAGGGAGGAGCTACTCTCAAAAATGGTATACCTGTCACAAAATGCCCTCCTTCATTACCTCTCCTCTAATCGTCTTTTTCTCATCTCTGGAAGCAAGTATGATTTTACTGATGAAGAGGTGATAATGTCAATTGCAGCAGAAAACAATTTCCCATCCACCTTGCAGTCCATTTTTGGTTGCATTTATGATTTGCTTTATGTTTTCTCGAATCTGTCAAGGAATCTAAATTTCATTGAGCATACACACATATTGCTGGTTAGAAATTGTAAGTATCAAAGACTAAGGTCCATCATTATTGATCCTACCCTTTACTTATCAAAGAAATCTGATTTAGCATTGACCACTCAAGGAAGAACCCTTCCCACGTCTTTTAAACTGTTTAGTGGTATTTGTTCTCGTGTAACGATTCTGTTTGACGGTAAGGTGTGTTCGCTGGTGGCTGCTAGTTTATGGTTTGAGTGGCTACACTTCGTGGCGTTTGTGACAAGGTGGTGGGTCGTGGTAGCTCACGTTTGCGCCAGTGGTGGTGGGTCGTGGAGGTTGGCTTCACGACGACGTAGGGCTGGTGGTCTGCAGAGTGTGGCATCGTCAAACATTTGGCTATTGAGATTAGTTGATTCCCTTGTTCTTTCTGATGAGTTTAATCATGGAAACTGCAGGTGGAGTGGCCTGCTATCAAACTATACATTTTGGATGTCTGAGCGGCTTATAGTAGGAGTGGTAGCCCAACAAATCACAGGCATAAGTGGGTTTTGCAGCCACTCAACTATTTGGGTTGTTGATTGTGTGCTCTCTGCAAGATTTGAAGTTGAGGTGGGGCTGTTTGGATTAGATGGAGAAGTTGATAGGTTGAAGCGTGACAGACAAGTTCTTATGGCGGAGTTGGTGAAACTCAGACAACAACAACAGAATACTAGAGTTCACATTCAAGCAATGGAAGGAAGGCTTAAAAGGACTGAGCAAAAACAGCAGCAGACGATGAATTTCTTGGCCAGGGCAATGCAGAATCCCAACTTCGTGCAACAATTGGTTCAGCAAAAGAAGCTGAGAAAGGAGGTTATGGAAGCTTTTTCTAAGAAGAGGAGGAGTCTTGATCAAGGGTCTAGTAATGTTGTTGAAGTAGGAGAGTTACACTAG 1311 0.4302 MVKSEMAESEVEVIHSWTAPRSLSTSLMYSFAQRDDIEVLDEPLYAYFLKVTGLDRPYREELLSKMVYLSQNALLHYLSSNRLFLISGSKYDFTDEEVIMSIAAENNFPSTLQSIFGCIYDLLYVFSNLSRNLNFIEHTHILLVRNCKYQRLRSIIIDPTLYLSKKSDLALTTQGRTLPTSFKLFSGICSRVTILFDGKVCSLVAASLWFEWLHFVAFVTRWWVVVAHVCASGGGSWRLASRRRRAGGLQSVASSNIWLLRLVDSLVLSDEFNHGNCRWSGLLSNYTFWMSERLIVGVVAQQITGISGFCSHSTIWVVDCVLSARFEVEVGLFGLDGEVDRLKRDRQVLMAELVKLRQQQQNTRVHIQAMEGRLKRTEQKQQQTMNFLARAMQNPNFVQQLVQQKKLRKEVMEAFSKKRRSLDQGSSNVVEVGELH 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03319 436 PANTHER AMINO-ACID AMINOTRANSFERASE 10 66 - -
Vimu11g03319 436 Coils Coil 339 359 - -
Vimu11g03319 436 Pfam Sulfotransferase domain 14 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03319 Vimu-Chr11 53538535 53545975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03319 326 434 HSF AT3G22830 61.818 4.44e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03319 K09419 - gmx:100809515 160.999