Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03306 ATGTGGCTTGAGTGGATATTGATGGTTAAGGCTGACAGCTCCCTGCCTTGCTCACACCATGTGGCTTGGCATTCACCTTCTTTGAATTACTTAAGCATGCAGCCTAAGCCCGGCTCACTCGGTCTCCCAACATATCTAAACTCAAGCACTTCCATCTTACCTCATGGGCTTGCAGCTCCTTCTATTCGAAGTCTGAAGACTGAGCTAACAAATGAAGTGCAAGGATACCTTAAGTATCACAACGGAGACACGAGTCTGAAAGAAATGCATCTTGGAGGAGCTTTACAAAATGCAAATCCTTCTTTGCAAAAGAGGTTACTTATCTTTGACCGCTCTGATAATAAGACAAGGTTGTTTTATGGGTCTGTCCCTCCTCTTGTCCAGAGTCCAATTGTCACTGCTAAGAAGATTGCTCAAAGTTATGACATAAATCGGGAGGAACAGGCTAGAATTATGGGTCAAAAGCATCTTGCCAGCTATGGTTTACTGAAAGAGTCTGTTAAGGATAATGCAGTTATTGAAGAAAGTGAAAAGCATGAAGATACGGAAGAAATAAATGCATTGCTTTATTCCGATTATGACAGCAGTGAATATGATGAGGATAATTGTGATGAGGTAACAAGTACAGATCGTTCTCCTTTGGCAACTAAAAGGACTTATGCGATACAAGAACAATGTGAGGACTTGAAGGAGGAGGTTGCCAGCTCCTGTTGGCCTAAGAAAAAGATGAAGTTAATTACTGGTGGCGACAATAGGTCATCCCCACGTGTGGACAAAACTACTGTGGTACAACCAAATGAAACCTGTGATTATGTTAGTGACGCTGAATCAAAGAACTCTAGTGGTTGGACATATTCTGTTGATAAAACTAAAGTAGATGATTCAGTGGTGTGTGATATCAAATTAAAAAAGGATAAGATCCGGGAATCTTTGAGAGTTCTGGAGAATTTAATTCCTGGTACAAAAGGAAAGGAGCCAATGTTAGTCATTGATGGAACTATTGAGTACTTGAAAGTTTTGATGTCCCAAACTGGTTCTCTTGGGGTAGAATATCACTAA 1059 0.407 MWLEWILMVKADSSLPCSHHVAWHSPSLNYLSMQPKPGSLGLPTYLNSSTSILPHGLAAPSIRSLKTELTNEVQGYLKYHNGDTSLKEMHLGGALQNANPSLQKRLLIFDRSDNKTRLFYGSVPPLVQSPIVTAKKIAQSYDINREEQARIMGQKHLASYGLLKESVKDNAVIEESEKHEDTEEINALLYSDYDSSEYDEDNCDEVTSTDRSPLATKRTYAIQEQCEDLKEEVASSCWPKKKMKLITGGDNRSSPRVDKTTVVQPNETCDYVSDAESKNSSGWTYSVDKTKVDDSVVCDIKLKKDKIRESLRVLENLIPGTKGKEPMLVIDGTIEYLKVLMSQTGSLGVEYH 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03306 352 PANTHER TRANSCRIPTION FACTOR BHLH145 17 350 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03306 Vimu-Chr11 53351476 53355618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03306 92 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 33.456 3.74e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03306 - - gmx:100817942 493.041