Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03181 ATGTTGGGTGCAGCTGGCATTTTCATCCCAGAATTCCTCACAAAGATTGGTGTCCTTAACACCCCTTCATGGTACACTGCTGGAGAGTTGGAGTACTTCACAGACACTACCACACTGTTCATAGTTGAGCTCTTTTTCATTGGGTGGGCTGAGGGTAGAAGATGGGCTGACATCATCAAACCAGGCTGTGTCAACACTGACCCCATCTTTCCCAACAACAAGCTCACAGGAACTGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCACTTGGCTGGGGAAGTGGTTCTCCTGAGAAGATCAAAGAGTTGAGAACAAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCAGATCCGGGCCATGCCACTATTTTTGCTGTAAGTTCATTTCACAACTAG 474 0.4852 MLGAAGIFIPEFLTKIGVLNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAVSSFHN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03181 157 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 152 IPR001344 GO:0009765|GO:0016020
Vimu11g03181 157 Gene3D Chlorophyll a/b binding protein domain 1 146 - -
Vimu11g03181 157 SUPERFAMILY Chlorophyll a-b binding protein 1 151 - -
Vimu11g03181 157 Pfam Chlorophyll A-B binding protein 1 126 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03181 Vimu-Chr11 51168103 51168576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03181 1 152 Chloroplast and Mitochondria Gene Families AT3G61470 92.763 1.16e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03181 K08908 - gmx:100802138 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00058 10 346199 347451 Vimu11g03181 11 51168103 51168576 PCT