Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03173 ATGTTTGATGCAGCTAATGCTCTGAGGGCTATGTTTCAAAGTATGAACTCACCATCTCAGCTAAATTGGAATGGGGAAGATCCTTGTGGACAGTCTTGGCAAGGCATCACTTGCTCTGGCAATCGAGTCACAGAGATTAAGTTGCCTGGTCGTTCACTTTCTGGATCTTTCGGTTACCAGCTAGAATCCTTGTCATCGCTTACAAACCTCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCAGTAGTACCAAGAAATCGAAATCACAAATCTGGGGGACATACCCCATCAGATGCTGGCTCAAGTGACGATGGAGGCAAAAAATCTGGTATTGGAGGTGGTGGCATTGCTGGAATAGTAATCTCCATCCTGGTTGTTGCGGCAATAGTGGCATTCTTTCTGGTGAAGAAAAGATCTAAAAAGTCGTCTGGTGATATTGAAAAGCTTGACAATCAACCCTTGGCTCCTCATACTTCACATCATCATGGTCAGCATGTTATTCTTGTATGCTATTGA 522 0.4559 MFDAANALRAMFQSMNSPSQLNWNGEDPCGQSWQGITCSGNRVTEIKLPGRSLSGSFGYQLESLSSLTNLSGPAPPPPPGTPPVVPRNRNHKSGGHTPSDAGSSDDGGKKSGIGGGGIAGIVISILVVAAIVAFFLVKKRSKKSSGDIEKLDNQPLAPHTSHHHGQHVILVCY 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03173 173 MobiDBLite consensus disorder prediction 145 164 - -
Vimu11g03173 173 Pfam Leucine rich repeat N-terminal domain 4 39 IPR013210 -
Vimu11g03173 173 Gene3D Ribonuclease Inhibitor 3 76 IPR032675 -
Vimu11g03173 173 MobiDBLite consensus disorder prediction 67 110 - -
Vimu11g03173 173 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 71 IPR046959 -
Vimu11g03173 173 MobiDBLite consensus disorder prediction 71 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03173 Vimu-Chr11 51067420 51069409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03173 7 70 Strubbelig Receptor Gene Family AT3G14350 61.194 9.14e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03173 - - gmx:100817422 124.02