Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03141 ATGCTACTGCTACCCTACACACTACACTACAATACAAATAATTATAATACTGATTCATTAACCCTTCCTTCTTCTTCCACCACACACAACACATGCACTCTCTCATCTACACACTTTTTCCCTTTAAATTTTCCATCTTCACTTCACTTCACCTTGCATACCACTTCCATGGCTGCGTTTTCCACCTTCTTAGTTTTCCTATTTCTCGTAGGAACTCTAACACAGGTTGCTTTTTCTTCCGACCAAGAAAAGAAAAAAACTTTCATAGTCCAAGTTCATCATCAAACAAAGCCTTCCATTTTCCCAACACACAGACACTGGTATGAGTCATCGCTGTCTTCCATTTCCAGCACCGCTTCCGTTATCCACACCTATGACACCGTTTTTCACGGCTTTTCCGCCAAGCTCTCATCTTCTGAGGCACAGAAGCTGCAGGCGCTCAGCCACGTCATCACTCTCATACCCGAACAGGTTCGACAGCTTCACACCACGCGCTCCCCTCAGTTCCTTGGTCTCACCACCGCCGATCGCGCCGGGTTGCTGCACGAGACTGATTTCGGCTCGGATCTCGTCATAGGCGTATTCGATACCGGAATCTGGCCGGAGCGCCAGAGTTTCAGCGGTCGCGACCTGGGGCCCGTTCCTGCTAAGTGGAAGGGCGAGTGCGTCGCCGGGAAGAGCTTCCCGGCTACCTCATGCAACCGGAAAATCATCGGAGCCAGGTACTTCTCCGAAGGGTACGAGGCCACTAACGGGAAGTTGAACGAGACCGTGGAGTTCCGCTCGGCAAGAGACTCCGACGGCCACGGCACTCATACGGCGTCCATCGCCGCTGGAAGGTACGTGTCGCCGGCGTCAACGTTGGGTTACGCGAAAGGAGTCGCCGCCGGCATGGCGCCGAAAGCGCGGTTGGCGGTGTATAAAGTATGTTGGCTCGGCGGGTGCTATGGCTCCGACATCCTCGCCGCGTTCGACGCTGCCGTGGCCGATGGCGTCGACGTGGTGTCGCTTAGCGTCGGAGGAGTGGTGGTGCCGTACCACCTCGACGAGATTGCGATTGGCGCCTTCGGCGCCACCTCGGCTGGCGTTTTTGTCTCCTCCTCAGCTGGCAATGGCGGTCCCGGTGGCCTCACAGTGACGAATGTGGCGCCGTGGGTTACCACCGTAGGCGCTGGAACTATAGACAGAGATTTTCCGGCCAGTGTTAAGCTTGGAAATGGAAAAATAGTGCCCGGGATTAGTATTTATGGTGGACCTGGTTTAACTCCGGGTCGGATGTACCCGATTGTGTATGGGGGTAGTGGACAGTTTGGTGGTGGCGGTGGCGGTGGAGGTAATGGTTATTCTTCTGCACTTTGTTTGGAAGGTTCCTTGGATCCCGAGACTGTGAAAGGAAAAATTGTTGTATGTGATAGAGGGATTAATGCAAGGGCAGCTAAAGGTGAAGAAGTGAGAAAAAATGGAGGGGTTGGCATGATTTTAGCCAACGGTGTGTTTGACGGTGAAGGGTTGGTGGCGGATTGCCACGTGTTGCCTGCCACGGCGGTTGGTGCCACAGCGGGAGAGAAAATCCGTGGGTACATTGGTAATTCGCGGTCACCGGCAACTGCCACAATTGTGTTCAAGGGAACAAGGCTCGGTGTTAAGCCAGCACCTGTGGTGGCATCGTTTTCTGCCAGAGGCCCTAACCCTGTGTCCCCTGAGATTCTGAAGCCCGATGTTATAGCCCCAGGGTTGAACATTCTTGCAGCTTGGCCTGATCATGTAGGACCTTCTGGGGTTCCATCTGATGGGCGTAGGACTGAGTTTAACATACTTTCTGGAACTTCCATGGCTTGTCCTCATGTTTCTGGTTTGGCTGCTCTGTTGAAGGCAGCACATCCTGATTGGAGTCCTGCTGCTATTAGATCAGCCCTGATGACCACTGCTTATACTGTGGACAACAGAGGTGATCCCATGTTGGATGAATCCACCGGAAATGTTTCCTCAGCCTTTGATTATGGTTCTGGCCATGTTCATCCTGTTAAAGCCATGAACCCTGGCTTGGTTTATGACATCTCCCCTTCTGATTATGTGAATTTCTTGTGCAATTCAAATTACACCACCAACAGCATCCATGTGATCACAAGAAAGAGTGAAGATTGTAGAGGAGCTAAAAGGGCAGGGCATGCTGGGAATCTGAATTACCCTTCATTCTCTGCAGTGTTTCAGCAATATGGAAAGAAGAGAATGTCTACACATTTTATCAGGACTGTAACAAATGTCGGCGATCCTAATTCAGTGTACAAGGTCACCATCAAGCCACCAGGTGGGATGGTGGTCACAGTAAAACCAGACACCCTGACTTTCAGGAAGATTGGTCAGAAATTGAACTTTCTTGTTAGGGTACAAACTAGGGCTGTTAAGCTTACACCTGGAAGTTCTAGTGTCAAGAGTGGTTCCATAGTGTGGTCTGATGGGAAACATACTGTGACAAGCCCTTTGGTTGTCGCAATGCAGCAACCTCTGGATTAG 2514 0.5119 MLLLPYTLHYNTNNYNTDSLTLPSSSTTHNTCTLSSTHFFPLNFPSSLHFTLHTTSMAAFSTFLVFLFLVGTLTQVAFSSDQEKKKTFIVQVHHQTKPSIFPTHRHWYESSLSSISSTASVIHTYDTVFHGFSAKLSSSEAQKLQALSHVITLIPEQVRQLHTTRSPQFLGLTTADRAGLLHETDFGSDLVIGVFDTGIWPERQSFSGRDLGPVPAKWKGECVAGKSFPATSCNRKIIGARYFSEGYEATNGKLNETVEFRSARDSDGHGTHTASIAAGRYVSPASTLGYAKGVAAGMAPKARLAVYKVCWLGGCYGSDILAAFDAAVADGVDVVSLSVGGVVVPYHLDEIAIGAFGATSAGVFVSSSAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPASVKLGNGKIVPGISIYGGPGLTPGRMYPIVYGGSGQFGGGGGGGGNGYSSALCLEGSLDPETVKGKIVVCDRGINARAAKGEEVRKNGGVGMILANGVFDGEGLVADCHVLPATAVGATAGEKIRGYIGNSRSPATATIVFKGTRLGVKPAPVVASFSARGPNPVSPEILKPDVIAPGLNILAAWPDHVGPSGVPSDGRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGDPMLDESTGNVSSAFDYGSGHVHPVKAMNPGLVYDISPSDYVNFLCNSNYTTNSIHVITRKSEDCRGAKRAGHAGNLNYPSFSAVFQQYGKKRMSTHFIRTVTNVGDPNSVYKVTIKPPGGMVVTVKPDTLTFRKIGQKLNFLVRVQTRAVKLTPGSSSVKSGSIVWSDGKHTVTSPLVVAMQQPLD 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03141 837 FunFam subtilisin-like protease SBT1.5 395 546 - -
Vimu11g03141 837 CDD PA_subtilisin_like 401 539 - -
Vimu11g03141 837 Gene3D Peptidase S8/S53 domain 189 691 IPR036852 GO:0004252|GO:0006508
Vimu11g03141 837 Gene3D - 395 547 - -
Vimu11g03141 837 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 72 162 IPR037045 -
Vimu11g03141 837 FunFam Subtilisin-like protease SBT1.5 695 833 - -
Vimu11g03141 837 FunFam Subtilisin-like protease SBT1.9 76 162 - -
Vimu11g03141 837 CDD Peptidases_S8_3 160 644 IPR034197 -
Vimu11g03141 837 Gene3D - 695 833 - -
Vimu11g03141 837 Pfam PA domain 447 524 IPR003137 -
Vimu11g03141 837 SUPERFAMILY Subtilisin-like 161 682 IPR036852 GO:0004252|GO:0006508
Vimu11g03141 837 Pfam Subtilase family 187 660 IPR000209 GO:0006508|GO:0008236
Vimu11g03141 837 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 114 830 IPR045051 -
Vimu11g03141 837 Pfam Fibronectin type-III domain 726 830 IPR041469 -
Vimu11g03141 837 ProSitePatterns Serine proteases, subtilase family, serine active site. 608 618 IPR023828 -
Vimu11g03141 837 FunFam Subtilisin-like protease SBT1.5 189 406 - -
Vimu11g03141 837 Pfam Peptidase inhibitor I9 87 162 IPR010259 -
Vimu11g03141 837 ProSiteProfiles Serine proteases, subtilase domain profile. 167 678 - -
Vimu11g03141 837 PRINTS Subtilisin serine protease family (S8) signature 187 206 IPR015500 -
Vimu11g03141 837 PRINTS Subtilisin serine protease family (S8) signature 607 623 IPR015500 -
Vimu11g03141 837 PRINTS Subtilisin serine protease family (S8) signature 265 278 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03141 Vimu-Chr11 50800532 50803045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03141 87 836 Subtilisin-like Serine Gene Family AT3G14240 75.397 0.0 1176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03141 - - gmx:100808511 1335.09