Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03120 ATGGCCAAAGTGGGAAAACTTACAAAGCTGAAGTCAGCGATCAAGAGATGGCCCTCATTGACCAAGCTCAGCCGCGGCAACAGCTGTGTCTCCTCCCACAAAGAACATGCACATGAACAAGAGCTTCATGCTGTTTATGTTGGCAAATCTAGGAGGCGCTACCTCGTAAACTCCGAAGTGATCGACCACCCTGTGTTTCAGGAGCTAGTTGATAGGTCTTCTTCGTCTCATGATGATGGGGTGGTGGTGTCCTGTGAGGTGGTGCTGTTCGAGCACTTGCTGTGGATGCTTGAGAGCGAAGAGACCCAGTTGGGGTCCATGGATGAGCTGGTCGAGTTTTACTCTTGTGCATGCTGA 357 0.5098 MAKVGKLTKLKSAIKRWPSLTKLSRGNSCVSSHKEHAHEQELHAVYVGKSRRRYLVNSEVIDHPVFQELVDRSSSSHDDGVVVSCEVVLFEHLLWMLESEETQLGSMDELVEFYSCAC 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03120 118 Pfam Auxin responsive protein 17 97 IPR003676 GO:0009733
Vimu11g03120 118 PANTHER EXPRESSED PROTEIN 14 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03120 Vimu-Chr11 50651042 50651428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03120 3 97 Calmodulin-binding Proteins AT4G34750 24.242 1.14e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03120 - - gmx:100797158 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03120 11 50651042 50651428 Vimu11g03120 11 50651042 50651428 ECH