Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03119 ATGGGAGGGTTAGTAGTACTGATATGCATAGTTGTTTCATGGATATTCATACATAGATGGAGTCAAAGAAACAAGAAAGGTCCAAAAACTTGGCCCTTTTTTGGAGCTGCTATTGAACAATTGATGAACTATGACAGAATGCATGATTGGCTGGTCAATTATTTGTCCAAATCAAAAACTGTTGTGGTTCCTATGCCTTTCACAACTTATACTTACATTGCTGACCCTAATAATGTAGAACATGTACTCAAGACCAACTTCAATAATTATCCCAAGGGTGAAGTGTACCATTCATATATGGAAGTGCTTCTTGGAGATGGGATATTTAATGTTGATGGTGAGACTTGGAAGAAGCAAAGGAAAACTGCAAGCTTAGAGTTTGCATCCAGAAATTTAAGGGAATTTAGCACAAAAGTTTTCAGGGAATATGCCTTGAAACTTTCTGCTATTCTCAGTCAAGCATCTATCCTTAACCAAGAAATAGACATGCAGGAACTGTTGATGAGAATGACTTTGGACTCCATATGTAAGGTTGGATTTGGAGTGGAAATTGGAACACTGTCTTCCAATTTACCAAAGAACAGTTTTGCTGATGCATTTGACACTGCAAATATCATAGTAACACTTCGTTTCATTGATCCACTTTGGAAGATTAAAAAAATGCTAAGTATAGGATCTGAAGCACAACTTGAGAAGAGTATCAAAGTTGTTGATGATTTCACCTACTCAGTAATTCGGAAAAGGAAGGCAGAGATAGAAGATGTCAGAAAAAGTGGGCAACAAAATCAGATGAAGCATGATATATTATCAAGATTCATAGAACTAGGAGAAAGCAATGCAACGGACAAGAGTTTGAGAGATATTGTGTTGAACTTTGTGATTGCTGGTCGAGACACAACTGCAACAACCCTGTCATGGGCCATATACATGGTAATGACACATGCCCATGTTGCTGACAAACTTTACCAGGAGCTGAAACTTTTTGAGGAGCATCATGCAAAAGAAGAGAACATTTCCTTGCCTCAATGTGACAAAGAGGACTCAGAATCATTCAATCAAAGAGTAGAACAATTTTCAAGGCTTTTGAATAAAGATTCACTAGAGAGATTGCACTATCTGCATGCTGTGATAACAGAGACCTTAAGATTGTATCCAGCAGTTCCTCAGGATCCTAAGGGCATATTAGAGGATGATGTATTGCCAGATGGAACCAAAGTAAAGGCAGGGGGAATGGTAACATATGTTCCATACTCTATGGGAAGGATGGAGTATAATTGGGGTTCTGATGCAGCTTCATTTGTTCCTGAGAGATGGTTCAAAGATGGTGTTCTAAAAAATGAGTCTCCATTCAAATTCACTGCTTTTCAGGCAGGTCCTAGGATATGCCTTGGCAAGGACTCTGCATATCTGCAGATGAGGATGGTGCTAGCTATTTTGTGCAGATTTTACAAGTTCAACTTGGTGCCAGGTCATACAGTGAAATATAGGATGATGACAATATTATCAATGGCTCATGGTTTGAAAGTTACCATACACAAACGTTGTTAG 1548 0.385 MGGLVVLICIVVSWIFIHRWSQRNKKGPKTWPFFGAAIEQLMNYDRMHDWLVNYLSKSKTVVVPMPFTTYTYIADPNNVEHVLKTNFNNYPKGEVYHSYMEVLLGDGIFNVDGETWKKQRKTASLEFASRNLREFSTKVFREYALKLSAILSQASILNQEIDMQELLMRMTLDSICKVGFGVEIGTLSSNLPKNSFADAFDTANIIVTLRFIDPLWKIKKMLSIGSEAQLEKSIKVVDDFTYSVIRKRKAEIEDVRKSGQQNQMKHDILSRFIELGESNATDKSLRDIVLNFVIAGRDTTATTLSWAIYMVMTHAHVADKLYQELKLFEEHHAKEENISLPQCDKEDSESFNQRVEQFSRLLNKDSLERLHYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGSDAASFVPERWFKDGVLKNESPFKFTAFQAGPRICLGKDSAYLQMRMVLAILCRFYKFNLVPGHTVKYRMMTILSMAHGLKVTIHKRC 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03119 515 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 Pfam Cytochrome P450 27 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 PANTHER CYTOCHROME P450 15 509 - -
Vimu11g03119 515 FunFam Alkane hydroxylase MAH1 21 515 - -
Vimu11g03119 515 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 SUPERFAMILY Cytochrome P450 26 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 Gene3D Cytochrome P450 13 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03119 515 CDD CYP86A 59 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03119 Vimu-Chr11 50641112 50643713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03119 1 514 Cytochrome P450 AT1G69500 75.526 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03119 K20495 - gmx:100787802 961.829