Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03084 ATGGCTCCCTTCTCTCTTCTATCTTTCCTCTTTCTTATACTTCTATCTGTTCTTCTTTCTGTCTCATCCTCATCAGACGCTCCACGAACCTACATAGTCCACGTGGCGCAATCGCAGAAGCCCACGCTTTTCTCCACACACCACCACTGGTACACTTCCATCGTCCGCTCCCTCCCTACCTCCCCCCACACACCCACCCTCCTCTACTCCTACTCCGCCGCCGCCGCCGGCTTCTCCGTCCGTATCACGCCTGAACAGCTCTCTCACCTCCGCAGCCACCCTGCCGTCCTCGCGGTCGAGCCTGACCAGGTCCGCCACCCCCACACCACCCACACCCCGCGGTTCCTCGGACTCGCCGACTCCTTCGGCCTCTGGCCCAACTCTGACTACGCGGATGACGTCGTCATCGGCGTCCTGGACACCGGGATATGGCCGGAGCTGAGGAGCTTCAACGACGACAACCTCTCTCCTGTTCCCTCCACGTGGAAAGGATCTTGCGAAGCCTCACGCGACTTCCCCGCTTCCTCCTGCAATAGAAAAATAATCGGCGCCAAAGCCTTTTACAAAGGCTACGAAGCCTACCTCGATGGACCGATCGATGAAACCGAGGAATCGAAGTCTCCGCGAGACACCGAAGGCCACGGCACGCACACCTCGTCCACAGCAGCAGGCGCCGTCGTTTCCAACGCGAGTTTGTTTCATTACGCTCAAGGCGAAGCCAGAGGAATGGCCACAAAAGCCAGAATCGCCGCTTACAAGATCTGCTGGCAATACGGTTGCTTTGATTCCGATATCCTTGCCGCCATGGACGAGGCTGTTGCCGACGGAGTTCACGTGATTTCGCTCTCCGTCGGTGCGTCAGGGTACTCGCCGCAGTATTTCCGTGATTCGATCGCTTTGGGAGCTTTCGGCGCTGCTCGTCACAATGTTCTGGTTTCGTGTTCCGCTGGGAACTCGGGGCCTGGTCCCTCCACTGCTGTGAACATTGCACCGTGGATTTTAACCGTTGGAGCTTCCACAATCGATCGAGAATTTCCTGCTAATGTTGTTCTCGGAGATGGAAGGGTTTTCGGTGGGGTGTCTCTGTATTACGGTGAAAGTTTGCCTGATTTTAAGCTTCAATTAATATATGCTAGAGATGCTGGGAACAGGTACTGTTACCTGGGGTCTCTGCTACCTTCTAAAGTACAGGGGAAGATTGTTGTTTGCGACAGGGGTGGGAATGCTAGGGTTGAGAAGGGGAGTGCAGTGAAGCTTGCCGGTGGGTTGGGAATGATTTTGACTAACCTTCTCGAGAATGGTGAAGAGCTTCTTGCTGATGCACATCTTTTGCCAGCTACCATGGTGGGTCAAATTGCAGGAGATCAGATCAAGGAGTATATAAGGTTGAGTCAGTACCCAACTGCGACTATTGAGTTTAAAGGAACTGTGATTGGAGGTTCTCCTTCTGCTCCTCAAGTTGCTTCATTTTCTAGCCGTGGACCCAACCGTCTCACACCGGAGATTCTCAAACCCGATGTCATTGCTCCTGGTGTTAACATTTTGGCAGGGTGGACTGGGAGAGTGGGGCCTACGGATTTGGACCTTGATCCTAGGAGGGTTGAGTTTAACATTATTTCGGGAACTTCTATGTCTTGTCCTCATGCCAGTGGCATCGCTGCATTGCTTAGGAAAGCCTATCCCGAGTGGTCACCTGCGGCTGTCAAGTCTGCTTTGATCACAACTGCTTATAATGTGGATAATTCTGGAGAGAATATTAAGGATCTTGGAACTGGGAAGGACTCAAATCCGTTTACGCATGGAGCTGGTCATGTTGATCCCAACAGGGCTCTTAACCCTGGCTTGGTTTATGATTCTGATATTAATGACTATTTGGCGTTTCTGTGCTCAATTGGGTATGATGCTAATCAGATTGCGGTTTTCACTAGAGAGCCTGCTGTTGCAAACGTCTGTGAAGGGAAAGTGGGTAGGACTGGGAGGTTGGCCAGTCCCGGTGATTTGAATTACCCTTCTTTCTCTGTGCAATTGGGTGGGGGAAATGATTTGGTCAAGTATAAAAGGGTTGTTACTAATGTGGGAAGTGTTGTTGATGCTGTTTACACTGTGAAAGTGAATGCTCCACCTGGTGTTGCTGTTACAGTCTCCCCCAGCACACTTGTGTTCAGTGGTGAAAACAAGACACAGGCATTTGAAGTTGCTTTTAGTAGAATCACGCCCGATACTTCTGACAGTTTTGGGTCAATTGAATGGACTGATGGAAGTCACGTTGTGAGGAGTCCAATTGGTGTTACATGGAGAGGAAGGACTGGTGATTACTCATCATCCCTTTGA 2331 0.5135 MAPFSLLSFLFLILLSVLLSVSSSSDAPRTYIVHVAQSQKPTLFSTHHHWYTSIVRSLPTSPHTPTLLYSYSAAAAGFSVRITPEQLSHLRSHPAVLAVEPDQVRHPHTTHTPRFLGLADSFGLWPNSDYADDVVIGVLDTGIWPELRSFNDDNLSPVPSTWKGSCEASRDFPASSCNRKIIGAKAFYKGYEAYLDGPIDETEESKSPRDTEGHGTHTSSTAAGAVVSNASLFHYAQGEARGMATKARIAAYKICWQYGCFDSDILAAMDEAVADGVHVISLSVGASGYSPQYFRDSIALGAFGAARHNVLVSCSAGNSGPGPSTAVNIAPWILTVGASTIDREFPANVVLGDGRVFGGVSLYYGESLPDFKLQLIYARDAGNRYCYLGSLLPSKVQGKIVVCDRGGNARVEKGSAVKLAGGLGMILTNLLENGEELLADAHLLPATMVGQIAGDQIKEYIRLSQYPTATIEFKGTVIGGSPSAPQVASFSSRGPNRLTPEILKPDVIAPGVNILAGWTGRVGPTDLDLDPRRVEFNIISGTSMSCPHASGIAALLRKAYPEWSPAAVKSALITTAYNVDNSGENIKDLGTGKDSNPFTHGAGHVDPNRALNPGLVYDSDINDYLAFLCSIGYDANQIAVFTREPAVANVCEGKVGRTGRLASPGDLNYPSFSVQLGGGNDLVKYKRVVTNVGSVVDAVYTVKVNAPPGVAVTVSPSTLVFSGENKTQAFEVAFSRITPDTSDSFGSIEWTDGSHVVRSPIGVTWRGRTGDYSSSL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03084 776 Gene3D - 628 765 - -
Vimu11g03084 776 FunFam subtilisin-like protease SBT1.5 342 478 - -
Vimu11g03084 776 FunFam Subtilisin-like protease SBT1.5 133 355 - -
Vimu11g03084 776 CDD PA_subtilisin_like 348 471 - -
Vimu11g03084 776 CDD Peptidases_S8_3 106 577 IPR034197 -
Vimu11g03084 776 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Vimu11g03084 776 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Vimu11g03084 776 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Vimu11g03084 776 SUPERFAMILY Protease propeptides/inhibitors 28 106 - -
Vimu11g03084 776 ProSiteProfiles Serine proteases, subtilase domain profile. 113 611 - -
Vimu11g03084 776 Pfam Fibronectin type-III domain 666 763 IPR041469 -
Vimu11g03084 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 108 IPR037045 -
Vimu11g03084 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Vimu11g03084 776 FunFam Subtilisin-like protease SBT1.9 19 108 - -
Vimu11g03084 776 Pfam PA domain 383 457 IPR003137 -
Vimu11g03084 776 MobiDBLite consensus disorder prediction 199 213 - -
Vimu11g03084 776 Pfam Peptidase inhibitor I9 30 106 IPR010259 -
Vimu11g03084 776 Gene3D Peptidase S8/S53 domain 133 624 IPR036852 GO:0004252|GO:0006508
Vimu11g03084 776 SUPERFAMILY Subtilisin-like 107 615 IPR036852 GO:0004252|GO:0006508
Vimu11g03084 776 MobiDBLite consensus disorder prediction 199 220 - -
Vimu11g03084 776 Pfam Subtilase family 132 581 IPR000209 GO:0006508|GO:0008236
Vimu11g03084 776 Gene3D - 342 478 - -
Vimu11g03084 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 761 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03084 Vimu-Chr11 50358077 50360407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03084 1 765 Subtilisin-like Serine Gene Family AT3G14067 65.504 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03084 - - gmx:100793990 1315.44