Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03080 ATGGCACTACAATTCCCATCACTGCCTTCTACCGCTCCCGCTTTTGTGGCAGCCTTTCTTGTTCTCCTCCTCTTCCTCCGCCGTCTCCGCCGCCGCCGATACAACCTCCCCCCGGGCCCAAAGCCCTGGCCTGTTATAGGCAATCTCAACCTAATCGGTTCCCTCCCGCACCGGTCCATCCACGAGCTCAGTCAAAAATACGGGCCCATCCTTCACGTCTGGTTCGGGTCAAATCCGGTGGTGGTAGGCTCGTCTGTGGAAATGGCAAAGGCCATTCTGAAAACTCACGACGCCACCCTCGCCGGCAGGCCCAAATTCTCTGCCGGAAAATACACAACTTACAACTACTCCGACATAACTTGGTCCCAATACGGCCCGTACTGGCGCCAGGCCCGTAGAATGTGCTTGATGGAGTTGTTCAGTGCAAAACGGCTGGAAGAATACGAATACATTAGAAAAGAAGAGATGCGTGGTCTGCTTAACCATCTCTTCAATTCCGCAAACAAAACAGTTTTAATAAAAGACCACCTTTCCAGTTTGAGTCTGAACGTCATAAGTCGCATGGTGTTGGGGAAGAAGTACCTGGAAGAGTCCGAAAACGCCATCGTTTCCCCCGAGGAGTTTAAAAAGATGCTCGACGAGCTGTTTTTGCTTAATGGGGTGTTGAACATTGGAGACTTTATTCCTTGGATTAACTTCCTTGACCTGCAGGGTTACATAAAGAGGATGAAGACTCTGAGCAAGAAGTTCGACAGGTTCATGGAACACGTCTTGGACGAACATATTGACAGGAAGAAAGGTGTTAAGGATTATGTCGCAAAGGACATGGTCGATGTTCTTCTACAACTTGCCGAAGATCCCACTCTTGAGGTGAAGCTTGAGAGGCATGGCGTCAAAGCTTTTACTCAGGACCTAATAGCAGGTGGGACTGAGAGTTCTGCAGTAACAGTGGAATGGGCAATCTCAGAGCTACTGAGAAGACCAGAGATTTTCAAGAAGGCAACAGAGGAGCTAGACAGGGTAATAGGAAGAGAAAGATGGGTTGAAGAGAAGGACATTGTGAATTTACCTTATGTTAATGCAATTTCAAAGGAAGTGATGAGGTTGCACCCTGTGGCACCAATGTTGGTGCCAAGAATGGCCAGAGAGGATTGCCATGTTGGAGGGTATGACATCCCTAAAGGGACTCAAGTGCTTGTGAATGTATGGACTATTGGAAGAGATCCTGCAATTTGGGACAACCCAGATGAATTCGAACCAGAGAGGTTTCTGAATAAGGAGATTGATGTGAAAGGTCATGACTATGAGTTGCTGCCATTTGGTGCTGGCAGAAGGATGTGTCCAGGGTACCCTCTTGGTCTTAAGGTCATTCAAGCAAGTTTGGCCAACCTCTTGCATGGATTCAACTGGAGACTGCCTCAGAATGTGAAGAAAGAGGATTTGAACATGGAAGAGATTTTTGGGTTGTCTACACCTAAGAAAATTCCTCTCGAAACAGTTCTTGAACCTAGACTTCCACACCATCTTTATTCTCTCTGA 1539 0.4756 MALQFPSLPSTAPAFVAAFLVLLLFLRRLRRRRYNLPPGPKPWPVIGNLNLIGSLPHRSIHELSQKYGPILHVWFGSNPVVVGSSVEMAKAILKTHDATLAGRPKFSAGKYTTYNYSDITWSQYGPYWRQARRMCLMELFSAKRLEEYEYIRKEEMRGLLNHLFNSANKTVLIKDHLSSLSLNVISRMVLGKKYLEESENAIVSPEEFKKMLDELFLLNGVLNIGDFIPWINFLDLQGYIKRMKTLSKKFDRFMEHVLDEHIDRKKGVKDYVAKDMVDVLLQLAEDPTLEVKLERHGVKAFTQDLIAGGTESSAVTVEWAISELLRRPEIFKKATEELDRVIGRERWVEEKDIVNLPYVNAISKEVMRLHPVAPMLVPRMAREDCHVGGYDIPKGTQVLVNVWTIGRDPAIWDNPDEFEPERFLNKEIDVKGHDYELLPFGAGRRMCPGYPLGLKVIQASLANLLHGFNWRLPQNVKKEDLNMEEIFGLSTPKKIPLETVLEPRLPHHLYSL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03080 512 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PANTHER CYTOCHROME P450 98A9 16 511 - -
Vimu11g03080 512 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 Pfam Cytochrome P450 37 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vimu11g03080 512 CDD CYP71_clan 68 497 - -
Vimu11g03080 512 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g03080 512 FunFam Cytochrome P450 84A1 28 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03080 Vimu-Chr11 50314045 50316119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03080 19 512 Cytochrome P450 AT5G07990 43.028 5.13e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03080 K20623 - gmx:100791502 931.013