Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03079 ATGAGTGATGTATATAGCTTTGGAGTTGTACTGTTAGAGCTCCTCACAGGAAAGAAATCCGTGGACAAAAAACGACCCAGCAGAGAGCAGGATTTGGTGGAATGGGCAAGGCCTTTGTTGAAGGATTCCTACAAACTGGAGAGAATAATGGACCCAAGACTTGAGGATCAATACTCAAGTGAAGGGGCTAAAAAGTTTGCAGCTTTGGCTTACCAATGTTTGAGCCACCATGCAAAGGGTAGGCCCACCATGAGAACAGTGGTTCGGACCTTAGAGCCTCTCTTGAAACTGAAAGACATCCCAGTTGGCCCTTTTGTGTATGTGGTGCCCAGTGAGGAAGACAAAGACATACCCAAAATGAGTGAAAAAGTAACAGAAAATGACCATGTTGTTGAGATCAACCAAATTGATGAATTAAAACCCAAAGAAGAAGAAAAGGCAGAGAAAAAAGAAAAGGGTCACCACCGGCAACGAAGAAGTCGTCGCCACAAACGTCGTGTTAAGCCCCTGAGGTCTCAAGCCGTTTACTCTGACACTGCTCTGTACAAAACTCTTGGCACAAATCTTTACTCTCCCAAAGAAGCACAGTGA 591 0.4467 MSDVYSFGVVLLELLTGKKSVDKKRPSREQDLVEWARPLLKDSYKLERIMDPRLEDQYSSEGAKKFAALAYQCLSHHAKGRPTMRTVVRTLEPLLKLKDIPVGPFVYVVPSEEDKDIPKMSEKVTENDHVVEINQIDELKPKEEEKAEKKEKGHHRQRRSRRHKRRVKPLRSQAVYSDTALYKTLGTNLYSPKEAQ 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03079 196 MobiDBLite consensus disorder prediction 133 151 - -
Vimu11g03079 196 ProSiteProfiles Protein kinase domain profile. 1 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g03079 196 PANTHER OS01G0588500 PROTEIN-RELATED 1 94 - -
Vimu11g03079 196 MobiDBLite consensus disorder prediction 133 174 - -
Vimu11g03079 196 SUPERFAMILY Protein kinase-like (PK-like) 2 112 IPR011009 -
Vimu11g03079 196 Gene3D Transferase(Phosphotransferase) domain 1 1 100 - -
Vimu11g03079 196 MobiDBLite consensus disorder prediction 152 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03079 Vimu-Chr11 50304940 50305530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03079 2 96 Receptor kinase-like Gene Family AT3G58690 52.632 6.71e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vimu11g03079 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03079 - - gmx:100790454 299.671