Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03078 ATGCCTTCGAAGAGGCTTCAATGGAGATCCTTAATACTTGGTTGTTTTCAGGCCAAGAACCAACAACCCTTGGATGCTCCAAACATAGTTTCGAAAAAGTCTTCATCGAGTAGAATCTTCCTCTCTGATTTAAGCCTCAGCGATTATTCATCACTCTCTATCATGAGTGATTTGTCCAATTCTCTTGTGGGATCAAATCTGCGTATTTTCACCTACCAGGAGCTCAAGGAGATCACGCACAGCTTTAGCAAATCCAACATTCTTGGGGAAGGTGGGTTTGGGAAAGTGTATAAAGGCTTCATCGATGATAATTTTAAGCCGGGGTTGAAAGCTCAGGTTGTGGCGGTTAAAGCCTTAAACTTGGATGGAAAACAAGGTCACAGAGAGTGGTTGGTAAGAGTTTGA 405 0.4272 MPSKRLQWRSLILGCFQAKNQQPLDAPNIVSKKSSSSRIFLSDLSLSDYSSLSIMSDLSNSLVGSNLRIFTYQELKEITHSFSKSNILGEGGFGKVYKGFIDDNFKPGLKAQVVAVKALNLDGKQGHREWLVRV 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03078 134 ProSiteProfiles Protein kinase domain profile. 82 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g03078 134 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Vimu11g03078 134 PANTHER OS01G0588500 PROTEIN-RELATED 38 132 - -
Vimu11g03078 134 Gene3D Phosphorylase Kinase; domain 1 53 134 - -
Vimu11g03078 134 SUPERFAMILY Protein kinase-like (PK-like) 57 129 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03078 Vimu-Chr11 50303598 50304002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03078 32 134 Trihelix Transcription Factor Family AT1G70460 40.777 8.67e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03078 - - gmx:100790454 202.216