Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03035 ATGGAGATGAATTATGCGTGGAAAGGAGTAGGAGAAATGTCTGAGAATTGCAGTGACAACTGTTGTGACAATTGGTTCACACTATCTCATCATTTGAAGGCAAAAGGAAATATTGATGATGTGTTTGATGATACCTTAATTTTCCAGTCTAGCTACTTACATAGGGAGCTCAAATCTCAATGGCCCTTCAGAGACTCTGAAAAGGTACCAAGGCTGGTGGTTGTTCAGATAGAAGCACATTCAATGGAGTTTTTGTTTTTTCAGTTTTGGGTAGTGGATCAAGTTGACCCCAGATCTTCAATTTGTTTGATTGCTGCAAATGTAACTTCAACTTGGTTATCTTGTCATTGGGAAATGTTGACTTGCATAGCTTGTACAAAACAACTCAATAATGGATCTCTTCGCCAAGAAGAAGAGGAAGAAGCTGTTCACACACCCAGCACAAAGCAAGCCATCAAGGCTCTCACTGCACAGATCAAGGACATGGCAGTGAAGGCTTCCGGGGCCTATAAGAGCTGCAGACCTTGTTCGGGATCTTCCAATGGTAACAGAAATAGGAAGTATGTAGACTCAGATATGGGGTCAGAGTCAGCCAGGTTCAACTGGGCCTACCGCAGAACTGGGAGCTCCAATTCAACCCCAAGGATGTGGGGGAAGGAGACAGAAGGTGGCAGGGTGAAAGGGCTTTCCAGTGGGGAAGGAACCCCAGCTTCAGTGAGTGGACGCACTGAGTCAGTGGTGTTCATGGAGGAAGATGAGCCTAAGGAGTGGATTGCACAAGTGGAGCCTGATTGCACATTTGGGGGAGTGAAAGCACATGCCTTTGCATGTGGTAGATGTTACTTGCTTTTTAGCCAATGTGACTTTGCTGTCCAGATTCTAGATTGGCAGGATCTATCTTGTTTCTATTGTGCCTCTGTGGAGGACCTCAGCTTTGTTCCATTGTCAGTAACTCATGCTTGGGGTGGTGTGCTTGAGAAATTTTCAACCAAGGGAAACATACCAGTGTGGGATGTGACATTTCTTTTTCTAAGCCCTTCGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAGAGGTTCAATCAGCAAGCAGTTCCTCTTCCAACCCCTCCTAGATCTGAAGATGAGAGCTCAAAGATTGAATCTGCTAGGGACAGTCCTGTCACTCCTCCACTCAGCAAAGAGCGTGCACCCCGCCATTTTCACCATCCAATGGGAATGGGCTACTCCTCATCAGATTCACTGGATCACCACCAAATGCATCCTCACCCTTGTTATGAAACAAGTGGTCTGGCATCAACACCTAATCTTTCCAACATTAGTGCACCAAAGACTGAAAAATCATCCCTTGATGGTTCTATCACTCAGGCGAGTTTTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTCTACATCACTATCAGAGCACTGCCTGGTGGAACTAGAGAACTCAGGCGTGTTCGTTTCAGCCGAGAAAGGTTTGGAGAAATGCATGCAAGATTATGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTGTGACTGTGACTATAGAAAATGCCTTTTACACAGACAACTGCTTCAGCAGGCTAACACAGTCTACGACGGCTTGGTCAAGGTGTGTGATAAGTTGACCAAGGTGTATCAGAGCACAACCTAG 1710 0.4556 MEMNYAWKGVGEMSENCSDNCCDNWFTLSHHLKAKGNIDDVFDDTLIFQSSYLHRELKSQWPFRDSEKVPRLVVVQIEAHSMEFLFFQFWVVDQVDPRSSICLIAANVTSTWLSCHWEMLTCIACTKQLNNGSLRQEEEEEAVHTPSTKQAIKALTAQIKDMAVKASGAYKSCRPCSGSSNGNRNRKYVDSDMGSESARFNWAYRRTGSSNSTPRMWGKETEGGRVKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPDCTFGGVKAHAFACGRCYLLFSQCDFAVQILDWQDLSCFYCASVEDLSFVPLSVTHAWGGVLEKFSTKGNIPVWDVTFLFLSPSRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLSKERAPRHFHHPMGMGYSSSDSLDHHQMHPHPCYETSGLASTPNLSNISAPKTEKSSLDGSITQASFQSAMPVIWKLNGLNRMNQESTSLSEHCLVELENSGVFVSAEKGLEKCMQDYGGKRTVLGYKNNTCDCDYRKCLLHRQLLQQANTVYDGLVKVCDKLTKVYQSTT 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03035 569 MobiDBLite consensus disorder prediction 371 454 - -
Vimu11g03035 569 PANTHER PROTEIN BREVIS RADIX-LIKE 1 119 264 IPR044532 -
Vimu11g03035 569 MobiDBLite consensus disorder prediction 435 454 - -
Vimu11g03035 569 MobiDBLite consensus disorder prediction 208 241 - -
Vimu11g03035 569 Pfam Transcription factor BRX N-terminal domain 140 176 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03035 Vimu-Chr11 49953828 49962212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03035 118 452 Major Intrinsic Protein MIP AT1G31880 32.958 8.17e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03035 - - gmx:100805480 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03035 11 49953828 49962212 Vimu11g03035 11 49953828 49962212 ECH