Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03014 ATGTCAGACCCGAAGACCCGGACCCGAGCTTACGATCCCTACAAGGATCTCGATGCTCCAATTCGAAACCTCTACCACCTCCCAACCTCGCCGGAGTTCCTCTTCGTTGAAGAGGCCCGCCGCAAGCGCCGCTCATGGGGCGAGAACCTCACCTTCTACACCGGATGCGGCTACCTGGCCGGAGCCCTTGGCGGTGCCGGCTCAGGACTCGTAGAGGGCGTCAGGGCCTTCGAATCCGGCGACACAACGAAGCTCCGAATCAACCGCGTCCTGAACGCGGCGGGACACTCGGGTCGGGTCTGGGGAAACCGGGTCGGGATACTGGGGTTACTCTACGCCGGAATCGAGAGCGGAATCGAGGCGGCGAGAGACGCCGACGACGTATGGAATAGCGTCGCAGCGGGGCTCGGCACCGGCGCACTGTACCGGGCGGCGAGAGGGGTGAGATCAGCGGCGGTAGCCGGAGCGGTGGGCGGCGCTGTCGTGGGAGTCGCCGTGGCGGGGAAGCAAGCGTTGAAACGATATGTGCCTATATGA 537 0.6443 MSDPKTRTRAYDPYKDLDAPIRNLYHLPTSPEFLFVEEARRKRRSWGENLTFYTGCGYLAGALGGAGSGLVEGVRAFESGDTTKLRINRVLNAAGHSGRVWGNRVGILGLLYAGIESGIEAARDADDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGAVVGVAVAGKQALKRYVPI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03014 178 PANTHER TIM23 20 166 IPR045238 GO:0022857
Vimu11g03014 178 Pfam Tim17/Tim22/Tim23/Pmp24 family 52 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03014 Vimu-Chr11 49793395 49793931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03014 8 178 Chloroplast and Mitochondria Gene Families AT1G72750 68.966 7.85e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03014 K17794 - gmx:100777112 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00366 4 2628825 2629391 Vimu11g03014 11 49793395 49793931 PCT