Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02987 GTTTTACATATTCACTTTCCCTCGTTAATATTCCCCTTTGGTGATTTCTTTCATATTTTTGTTAGGGACGAAGCTCATGTCATTGAGAATGTTGTCAATGATGTATTGCAAAAGCTTCATCTGCGATGCCCCACTGAATTAAAGGGCCTTGTTGCAAGTGAAGAAAATTGCAGAAACGTAGAATTATTACTAAAATCGTGTAGGGTCATTGGAATTTGGGGTATGGGTGGAACTGGTAAATCCACCATTGCTAAAATCTTGTTTGCTAAGCACTTTCCCCAATATGACCATGTCTGCTTTGTGACCAATGCAAAAGAATATTCCCTGGACAAGCTTTTCTCTACCATATTGAAGGAAGAGGTTTCCGAAAAAAATGTCGTAGGGTCATCGTTTCATATGAGGAGACTCAGAAGTAAAAAGGTTTTCATTGTACTTGATGATGTTGACATGGATAGTTTTGAGCCATTGGAGTATTTATGTAGAGAATATAAAGCCCAGCACCGTGATAGTAAACTCGTTATAACAACAAGAGATAGGCAATTGCTTGTTGAAAGGGTTGATGCGATATACGAGGTTCAGAAATGGAAGAAAACAGAATCTCTGAAGCTTTTTTGCTCAGAAGCCTTTAAGAAAAGTTATCCTGATGGAGGTTTTGACAGGCTCTCAGAAAGTGTAGTTGAATATGCCGGTGGCGTTCCATTAGCCCTTAAAGTTTTGGGGTCATATCTTCGTTCAAAAAGTTCCAGTTTTTGGAAAAGTACTATAAGAAAACTCAGCCTCTATCCTAACGAGAGAATTCAGGAAGTGTTAGAAATGAGCTACACTGGATTGCATGATCTAGAAAAAAAAATATTTCTAGACATTGTCTTTTTCTTTAGAGAAAAACAGAAAGATCAAGTGACAAGGATACTAGATGCCTGTGGTTTTGAAGCAACTAGTGGAATAGAAGTTCTCGCAGACAAAGCTTTGTTAACAATTTCATATACAAACATAATACAAATGCATGACTTGCTGCAACAAATGGGTTTGGAGATTGTACGTCTAGAATGTACAACAGATCCTGGCAGACGTAGTCGCTTGAAGGATAATGATGCTCATGAAGTGATTGAAGAAAACAAGGGAACTGATGCAATTCAAGGAATAGAACTGGATTTGTCTCAAGTTGAAAATTTACGTTTGCGTTCTGACACCTTGACAAAGATGAAAACCTTAAGATTTCTGAGATTCTATAACTCCTCAGGTCAGAGTTCTAGGAATACATACATCGACCTTCCTGCAACTCTTGAGCCATTTTCTGATAAACTAAGGTACATTGAGTGGATTGAATACCCTTTTGAGTGTCTTCCATCACCTTTTTGTGCAAAGTTTCTTGTTGAGATTCACATGGAACATGGCAAAATTAAACAACTTTGGCAGGGAATCCAGGAACTAGATAATTTAGAGGGAATTAACCTAAGTGGATGCAAACAGTTTGAAGAGCTTCCAGATTTGTCTAAGGCGCCGAAACTTAAATGGGTGAATCTCTATTGTTGTGAAAGTTTACGGTATCTTCACCCATCTGTTTTATCCTCGGCCACGCTTGTTACTTTGATACTGCATGGCTGTACAAAACTCGAGAGTGTTAAAGGAGAAAAGCGTTTAAAATCTCTAGGGTATATCAATGTCAATGGCTGCTTAAGTCTAGAGGAATTTGCAGTGTCAATAGTTTCAATTGAAATATTTGATTTGAGCAACAAAGAAATCCCAATGTCAGGCACACCAGTAAGGCGAAAGGGAAAACTCAAGACCAACAAAATATTGAAGGAGCTGATGCTATCTAATGGTCGACGACTTGGGAAGGATTTGAATAACTGCAACCTACCTTCCATGCAACATTTGTACATGCTACAGTTAGATCGATGCAATGTGACAAACTTGCCTGAAATCATTAAGAATTCGGGAAAGTTGACATTTTTGTCCTTGGAGAATTGTGACGGGTTTACGCATCTGCCAAAGCTGTCATCCAGCATCAATTACTTAGGTGTCATTAACTGCACGTCACTGGTGTCAGTGTCAGACTTAGACAATTTGGCAAATGTAATGTGCGGAAGTAGTAGATTCATTACATTCAAGAACTGCTTGAAATTGGATGAACATTCATGCAAACTTATAATGAAGAGCGTAAAGTTAATAATGGTGTGTGCTGCATTTGACAACCTGGTGAGAAAATCCAGTGACGTCCACGACTACAGTTATAACAGTGTTGAGCTTTGCTTACCAGGAAGCAAGGTCCCACAAGAGATTAAATATCGGAGCACAGAGTCCTCCATTACCATCGACCTTCCCAAACTTTCCAACTTGAGGGGCTTCATTTACTCTGTAGTACTTTCTCCATCTGGTGAAATGAAGAAGCATGACACCAAGATTATATGTAAACGCCACTTGAGAGAAAATACGAGGGAATCATGGGTATATAGTGATATCGAGGGCTTGAAGACCGATCATGTTTATATATGGTATGATCCATTCCACTGTGATGGTATTCTCAAATATAATGAGCCAAGTGTTTGGTTTGAGTTCTGTGTTACAAATGATAAAGGGGAAGTTGATGGCTCTATGTGTATTAAAGAGTGTGGTGTTGGCCTTATAAGTGTTTCAGAACTGCCGAGTGTTTTAGAAGAGTTGGACTGGCACTGGGATAAGAAGAAGGACTTAGTGAATAGAGTGGAGTTGATAACAGGACAAAGGATAACCTTAATAACATCAATTGAACAATCCGATGAGAGGAAGAACCATTTTTCTGCTGTGGAAGAGATTATCAATTCTACCCATAAGGAAGTCAAAACTGATTCTGATACAGATTGTGGGCAGAATACTACAAAATCTACAAATGCGGTCAAATATGAAGAAAGTGGAGAAACGGCAATCAAACAAGATGCAACATTGCCCGAAACTGTTGAGTCAGAGTTAGACAAAGAAAATGAATCTAAAGAAAAGTCAATAATGGTTGAACTAGAATCAGTTGAAGACAACAGAGGGAGTAAACAATATTTTTCAGGTGTCAAAGAGAGCATTGAATATTGTGCTAGCAGAGCAACCAATGCAACTGCTGAAAGAGGTCCCAAAGAAAAATCTACAAAGTCTACGGAAACTTGGTTGGAAGAATCGATCAAGCAGGTTGTAGGAATTCATGATACAGGCAACTCTGTTAAATACTCATCCTTGGACCTTGAGAATTGCCTCCAACAGTCGGATGAAAATCCATTTAAAATCTTTGATTTACTTTCTGATGAACTATCCCCTTCACTGAAACAATCAAGTGATGCTACAACTCTCCTCAATGAGTTCCGAACCTTAGTGTTCTCTACTTCGTTGCTAAAGAAAATTCCAGACCAATCCTATCAGCAGCAAGTTACAGAATCACTACAGAAACTTCACACTTATCGTGGAAAAATTACAAAAGAGCAAGAAGCTGGTTTAGACAAATTTATAGAGCTCTACAACAAAGCTGTCGACATTTCTCAAGATAAGATGTTAACCGAGGATAACCAAGCAAAACTGGCATCTGAGAAGAGAGACTTGTACAACAAACTTGAACATTCTAAACTGAAAGTTCAAAGGTTTGACACCACCATCTCAACTTATAAATCTCAGAGGGAAATCCTACAAAAGAGACAAAGGGAAATCCAAGAAGCTATAACAGAACTTGAACAAGAAAATGAAGCCTTGGAAAAGGATAGCTCAACACTAGAGGTTTTATACTCTGAACAACAAACCAAGAAGAAGGAAACACTTGAATCAGTGAAGTGTATTTCGATTTCTGTTGTTCAAACTACCAAACAATTAGAAGAACTTGAAAAGAAAAGATTGAGTTTGGCCTCAGCTTACGAAGACCTCAAAGAGCCATATCAAAGAATGAAAACAAAACCCCCATTTTATGTTTTACATATTCACTTTCCCTCGTTAATATTCCCCTTTGGTGATTTCTTTCATATTTTTGTTAGGGACCAAGCTCATGTCATTGAGAATGTTGTCAATGATGTATTGCAAAAGCTTTATCTGCGATGGCCTACTGAATTAAATGGCCTTGTTGGATATGAAGAAAATTGCAGAAATGTAGAATTATTACTAAAATCACGTAAGGTCATTGGAATTTGGGGTATGGGTGGAATTGGTAAGTCCACCATTGCTAAAATCTTGTTTGCTAAACACTTTCCCCAATATGACCATGTCTGCTTTGTGACCAGTGCAAAAGAATATTCACTGGAAAAGCTTTCCTCTACCATATTGAAGGAAGAGGTTTCCGAAAAAAATGTCGTAGGGTCATCGTTTCATATGAGGAGACTCAGAAGTAAAAAGGTTTTCATTGTACTTGATGATGTTGACATGGATAGTTTTGAGCCATTGGAGCATTTATATAGAGAGTATGAAGGCCAGCATAGTGATAGTAAACTCGTTATAACAACAAGAGATAGGCAATTGCTTGTTGGAAGGGTTGATGCGATATACGAGGTTCAGAAATGGAAGAAAACAGAATCTCTGAAGCTTTTTTGCTCAGAATCCTTTAAGAAAAGTTATCCTGAAGGAGGTTATGAGAGTCTCTCAGAAAGTGCAGTTGAATATGCTGGTGGCGTTCCATTAGCCCTTAAAGTTTTGGGTTCATTTCTTCGTTCAAAACAAATCAGGTTTTGGGAAAGTACTATAAGAAAACTCAGCTTGTATCCTAACGAGAGAATTCAGAAAGTGTTAGAAATGAGCTACACTGGATTGCATGATCTAGAAAAAAATATATTTCTAGATATTGTATTTTTCTTTAGAGAAAAAGAGAAAGATCATGTCACAATGATACTAGATGCCTGTGGTTTTGAAGCAACTAGTGGAATAGAAGTTCTCGCAGACAAAGCTTTGTTAACAATTTCACATACAAACATAATACAAATGCATGACTTGCTGCAACAAATGGGTTGGGAGATTGTACGTCAAGAATGTACAGCAGATCCTGGCAGACGTAGTCGCTTGAAGGATAAGGAAGCTCGTGAAGTGATTGAAGAAAACAAGGGAACTGATGCAATTCAAGGAATAGAACTGGATTTGTCTCAAGTTAAAAATTTACGTTTGCGTTCTGACACATTGACAAAGATGAAAACCTTAAGATTTCTGAGATTCTATAACTCCTCAGGTCAGAGTTCTACGAATACATACCTCGATCTTCCTGCAACTCTTGAGCCATTTTCTGATAAACTAAGGTACATTGAGTGGATTGGATACCCTTTTGAGTGTCTTCCATCACCTTTTTGTGCAAAGTTTCTTGTTGAGATTCACATGCAACACGGTAAAGTTAAACAACTTTGGCATGGAATCCAGGAACTAGATAACTTAGAGGGAATTGACCTAAGTGGATGCAAACAGTTTGAAGAGCTTCCAGATTTGTCAAAGGCGCCAAAACTTAAATGGGTGAATCTCTCGTGTTGTGAAAGTTTGCGGTATCTTCACCCATCTGTTCTATCCTCCACGCTTGTTACTTTGATACTGAATGGGTGTACAAAACTCGAGAGTGTTAAAGGCGAAAAGCATTTAAAATCTCTAGAGAAGATCAGTGTCAATGGCTGCTTACGTCTGGAGGAATTTGCAGTGTCACTAGATTTAAATAAAATATTGTATGCGTCTAGCAGAGGAATCCAAATGTCAGGCACACCAGTAAGGCCAACGGGGAAACTCGAATTGACACCGACGCTATCTAATCTGTACATGCTAAAGTTAGATCAATGCAATGTGACAACGTTGCCTGAAATCATTAAGAATTCCGGAAACTTGAGAATTTTGTCCGTGGAGAATTGTCTCGAGTTTATACATCTGCCAAAGCTTCCATCCAACATCGATTACTTAGGTGTCATTAACTGCACTTCACTGGTGTCAGTGTCAGACTTAGTCAATTTGGCAAATGTGATGCGGGGAAGTACCAGATTCATTACATTCAAGAACTGCTCGAAATTGGATGAACATTCATGCAAACTTATAATGAAGAGCGTAAAGTTAATAATGGTGTGTGCTGCATTTGACAACCTGGTGAGAAAATCCCGTGACGTCCACGACTACACTTATAACACTGTTGAGCTTTGTTTACCAGGAAACAAGGTCCCACAAGAGATTAAATATCGGAGCACCGAGTCCTTCTTTACCATTGACCTTCCCAAACTTTCCAACTTGAAGGGCTTCATTTACTCTGTGGTTCTCTCTCCATCTGGTGAAATGAAGAAGCATGACACCAAGATTATATGTAAACGCCACTTGAGAGAAAATACGAGGGAATCATGGGTATATAGTGATATCGAGTGCTTGAACACAGATCATGTTTATATGTGGTATGATCCATTCCACTGTCATGGCATTCTCAAATATAATGAGCCAAGTGTTTGTTTTGAGTTCTGTGTTATAAATGATAAGGGGGAAGTTGATGGCTCTATGTGTATTAAAGAGTGTGGTGTTGACCTTATAAGTGTTTCAGAACTGCCGAGTGTTTTAGAAGAGTTGGACTGGCACTGGGATAAGAAGAAGGACTTAGTGAATAGAGTGGAATCGGTAACAGGACAAAGGATAACCTTAACATCAATTGAACAATCCGATGAGTGGAAAGACCATTTTTCTGCTTTGGAAGAGATAATCAGTTCTACTCACAAGGAAGTCAAAACTGATTCTGGCACAGATTGTGGGCAGAATACTACAGAATCTACAAATGCGGTTAGTCAAGAGTTCTTATATGTACACAAGATTTCACAAACTTTGCCGTCCATTTACTAG 6777 0.3845 VLHIHFPSLIFPFGDFFHIFVRDEAHVIENVVNDVLQKLHLRCPTELKGLVASEENCRNVELLLKSCRVIGIWGMGGTGKSTIAKILFAKHFPQYDHVCFVTNAKEYSLDKLFSTILKEEVSEKNVVGSSFHMRRLRSKKVFIVLDDVDMDSFEPLEYLCREYKAQHRDSKLVITTRDRQLLVERVDAIYEVQKWKKTESLKLFCSEAFKKSYPDGGFDRLSESVVEYAGGVPLALKVLGSYLRSKSSSFWKSTIRKLSLYPNERIQEVLEMSYTGLHDLEKKIFLDIVFFFREKQKDQVTRILDACGFEATSGIEVLADKALLTISYTNIIQMHDLLQQMGLEIVRLECTTDPGRRSRLKDNDAHEVIEENKGTDAIQGIELDLSQVENLRLRSDTLTKMKTLRFLRFYNSSGQSSRNTYIDLPATLEPFSDKLRYIEWIEYPFECLPSPFCAKFLVEIHMEHGKIKQLWQGIQELDNLEGINLSGCKQFEELPDLSKAPKLKWVNLYCCESLRYLHPSVLSSATLVTLILHGCTKLESVKGEKRLKSLGYINVNGCLSLEEFAVSIVSIEIFDLSNKEIPMSGTPVRRKGKLKTNKILKELMLSNGRRLGKDLNNCNLPSMQHLYMLQLDRCNVTNLPEIIKNSGKLTFLSLENCDGFTHLPKLSSSINYLGVINCTSLVSVSDLDNLANVMCGSSRFITFKNCLKLDEHSCKLIMKSVKLIMVCAAFDNLVRKSSDVHDYSYNSVELCLPGSKVPQEIKYRSTESSITIDLPKLSNLRGFIYSVVLSPSGEMKKHDTKIICKRHLRENTRESWVYSDIEGLKTDHVYIWYDPFHCDGILKYNEPSVWFEFCVTNDKGEVDGSMCIKECGVGLISVSELPSVLEELDWHWDKKKDLVNRVELITGQRITLITSIEQSDERKNHFSAVEEIINSTHKEVKTDSDTDCGQNTTKSTNAVKYEESGETAIKQDATLPETVESELDKENESKEKSIMVELESVEDNRGSKQYFSGVKESIEYCASRATNATAERGPKEKSTKSTETWLEESIKQVVGIHDTGNSVKYSSLDLENCLQQSDENPFKIFDLLSDELSPSLKQSSDATTLLNEFRTLVFSTSLLKKIPDQSYQQQVTESLQKLHTYRGKITKEQEAGLDKFIELYNKAVDISQDKMLTEDNQAKLASEKRDLYNKLEHSKLKVQRFDTTISTYKSQREILQKRQREIQEAITELEQENEALEKDSSTLEVLYSEQQTKKKETLESVKCISISVVQTTKQLEELEKKRLSLASAYEDLKEPYQRMKTKPPFYVLHIHFPSLIFPFGDFFHIFVRDQAHVIENVVNDVLQKLYLRWPTELNGLVGYEENCRNVELLLKSRKVIGIWGMGGIGKSTIAKILFAKHFPQYDHVCFVTSAKEYSLEKLSSTILKEEVSEKNVVGSSFHMRRLRSKKVFIVLDDVDMDSFEPLEHLYREYEGQHSDSKLVITTRDRQLLVGRVDAIYEVQKWKKTESLKLFCSESFKKSYPEGGYESLSESAVEYAGGVPLALKVLGSFLRSKQIRFWESTIRKLSLYPNERIQKVLEMSYTGLHDLEKNIFLDIVFFFREKEKDHVTMILDACGFEATSGIEVLADKALLTISHTNIIQMHDLLQQMGWEIVRQECTADPGRRSRLKDKEAREVIEENKGTDAIQGIELDLSQVKNLRLRSDTLTKMKTLRFLRFYNSSGQSSTNTYLDLPATLEPFSDKLRYIEWIGYPFECLPSPFCAKFLVEIHMQHGKVKQLWHGIQELDNLEGIDLSGCKQFEELPDLSKAPKLKWVNLSCCESLRYLHPSVLSSTLVTLILNGCTKLESVKGEKHLKSLEKISVNGCLRLEEFAVSLDLNKILYASSRGIQMSGTPVRPTGKLELTPTLSNLYMLKLDQCNVTTLPEIIKNSGNLRILSVENCLEFIHLPKLPSNIDYLGVINCTSLVSVSDLVNLANVMRGSTRFITFKNCSKLDEHSCKLIMKSVKLIMVCAAFDNLVRKSRDVHDYTYNTVELCLPGNKVPQEIKYRSTESFFTIDLPKLSNLKGFIYSVVLSPSGEMKKHDTKIICKRHLRENTRESWVYSDIECLNTDHVYMWYDPFHCHGILKYNEPSVCFEFCVINDKGEVDGSMCIKECGVDLISVSELPSVLEELDWHWDKKKDLVNRVESVTGQRITLTSIEQSDEWKDHFSALEEIISSTHKEVKTDSGTDCGQNTTESTNAVSQEFLYVHKISQTLPSIY 2258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02987 2258 Gene3D - 1501 1584 IPR042197 -
Vimu11g02987 2258 Gene3D - 195 278 IPR042197 -
Vimu11g02987 2258 MobiDBLite consensus disorder prediction 946 962 - -
Vimu11g02987 2258 Coils Coil 1268 1288 - -
Vimu11g02987 2258 Coils Coil 1208 1246 - -
Vimu11g02987 2258 Gene3D Ribonuclease Inhibitor 343 732 IPR032675 -
Vimu11g02987 2258 Gene3D Ribonuclease Inhibitor 1643 2015 IPR032675 -
Vimu11g02987 2258 Pfam NB-ARC domain 1373 1575 IPR002182 GO:0043531
Vimu11g02987 2258 Pfam NB-ARC domain 68 264 IPR002182 GO:0043531
Vimu11g02987 2258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1345 1594 IPR027417 -
Vimu11g02987 2258 Gene3D - 1343 1493 IPR027417 -
Vimu11g02987 2258 Gene3D - 31 189 IPR027417 -
Vimu11g02987 2258 SUPERFAMILY L domain-like 1689 2064 - -
Vimu11g02987 2258 MobiDBLite consensus disorder prediction 941 968 - -
Vimu11g02987 2258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 288 IPR027417 -
Vimu11g02987 2258 SUPERFAMILY L domain-like 334 719 - -
Vimu11g02987 2258 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 567 IPR044974 GO:0006952
Vimu11g02987 2258 PRINTS Disease resistance protein signature 1441 1455 - -
Vimu11g02987 2258 PRINTS Disease resistance protein signature 1535 1549 - -
Vimu11g02987 2258 PRINTS Disease resistance protein signature 1781 1797 - -
Vimu11g02987 2258 PRINTS Disease resistance protein signature 1375 1390 - -
Vimu11g02987 2258 SUPERFAMILY "Winged helix" DNA-binding domain 1571 1656 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02987 Vimu-Chr11 49506249 49517023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02987 22 677 WRKY Transcription Factor Family AT4G12020 31.069 9.33e-66 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02987 - - vun:114166184 2063.89