Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02985 ATGGGTCCTAGTCTGATCAAGACTAGGTTAAGCTTAGCTCGATCAAGACAATGTCAACCTAAGTCAAGCTCAACCCATGTTGATTCGAGTTTGTTCCAGCTTAGAGATGAAGCTCAGGTCATCCAGAATCTTGTCAATGATGTATTGCAAAAGCTACACCTAAGATATCCTACGGAACTAAATGGCTTAGTCAGAATTAAAAATACTTGTGCAAAGGTGGATTTGTTACTGCGAAAATCTCGAGTCATTGGAATTTGGGGTATGGGGGGAATTGGCAAGTCAACCATTGCTAAAGCCTTGTTTGCCAAATACTTTCCCTATTTTGATCATGTCTGCTTCATGGCCAATGCAAATGAATTTTCGCTTGATAAGCTTTTCTCTGAGCTATTCAGAGAGGAAGTTTCCGCATCAAATGTGGTAGGATCAACATTTGATATGAGGAGACTCAAAAGGAAAAGGATTTTCATTGTACTTGATGATATGGATTGTTTAGACCTATTGGAATATTTATGTAGAGAGTATCAGAACCTAGATCCCAATAGTAAACTCATCATAACAACACGTGATAAGCAATTGCTTGAGGGAAGAGTTGATCAGATCTATGAGGTCAAGAAATGGGAAACCAGAGCATCTTTAAAGCTTTTTTGCTTAGAAGCATTCAAGAAAAGACATCCCAAAAGGGGTTTTGAGAGTCTCTCAGAAAGTGCAGTTGAATATGCTGGTGGTGTTCCATTAGCTCTTAAAGTTTTGGGTTCATATCTTCGTTCAAAAGGTATCAATTTTTGGGAAAGTACTATAAGAAAACTCAGCATGTATCCTAACGAGAGAATTCAGAAAGTGTTAGAAGTGACCTACATTGGATTACATGATCTTGAAAAGAATATATTCCTAGACATTGTATTTTTTTTCAAAGAAAAACAGAAAGATCATGTCATAACAATACTAGATGCCTGTGGTTTTGAAGCAACTAGTGGAATAGAAATTCTCGCAGACAAAGCTTTGTTAACAATTTCATATAGAAAGATAATACACATGCATGACTTGCTGCAACAAATGGGTTTGGAGATTGTTCGTCAAGAGAGTAGTGGGGATCCTGGTAGACGTAGTCGATTGAAGGATAAAGAAGCTCGCGAAGTGATTGAAGAAAACAAGGGAACTAGTGCTATTCAAGGCATAGCATTAGATCTGTCTCAAATTAAAGGTTTAATTTTGCATGCTGATACATTCACAAAAATGAAAACCTTGAGATTTCTGAAATTCTACAACAAATTGGGTCAGAGTGCCAGAGATACATACCTTGACCTTCCTGCAACTCTCGAGCCATTTTCTGATAAACTGAGGTACATTGAGTGGATTGGATACCCGTTTGAGTCTCTTCCATCACCTTTTTGTGCTAAGGTTCTTGTTGAGATTCACATGCCACACAGCAAAGTAAAACAACTTTGGCAGGGGATCCAGGAGCTTAATTATTTAGAAGGAATTAACCTAAGACAATGCAAGCAGTTTGAGGAGCTTCCGGATTTGTCTAAGGCACCGAGACTTAAATGGGTGAATCTCTCCTGCTGTGAAAGTTTGCTCTATCTTCATCCATCTGTTTTATCCTCAGGCACCCTTGTTACTTTGATACTGGATAAGTGTACAAACCTCAAGAGTGTTAAAAGTGAGAAACATTTAAAATCTCTTGAAAAGATCAGTGTCAATGGCTGCTTAAATCTGGTGGAATTTGCAGTTTCGTCCGATTTAATTGAAAATTTGGATTTAAGCAATACAGGAATCCAAATGTTGGGCACATCAATAGGGAGTATGCATAAACTTAAGTCGCTCAATCTGGAGGGCTTAAAACTCAAGCCTGTTTTAAAAGAGCTATCTTGCTTGACATCGCTCAAGGTGCTGAAGATTTCTGATAATGGACTAGTTATTGACAAACAGCAAATACATGTCCTGTTTAGTGGATTAAGGTACTTACAAATACTATATTTGAAAGATTGTAGTAAGTTGTTTGAACTCCCCGACAACATCAATCTCTTAACACAATTACAAGAACTAAGGTTAGACAGGAGTGATTTGAAAAGGTTGCCCGAAAACATTAAGAATCTTCAAGTGTTGGAAATTCTGTCCCTGGAGGATTGCAAGGAGCTTCTTTGCCTGCCAACGTTTCCATCCCTCATCAAGTATTTACGTGTCATTAACTGCACATCATTGGTGTCAGTGTCAAACTTAAAGACTTTGGCAATAGAAATGTTGGGAATGACAAAACGCACTACATTCAAGAATAGCGGGAAATTGGATGAAGATTCACTCAGAATTATTATGGAAAGCCTCCATTTAACAATGATGAGTGCTGCATATCACAATGTGTTAGTAAGAAAAACATATGGGACGTACAACAGCTGCAACTATACGAGTGTTGAGCTTTGTTTACCCGGAGGGAGTGTCCCTGAGCAGATTCATTATCGATCCACTCAGTCCTCCATTACCATTGTACTTCCTCCACGTTCTGAATTACTGGGCTTCATTTACTCAGTGGTTCTTTCTCCAGCTGGTGGAAAGAAGACTTTTGGCACTAAGATATTTTGTAAATGCCACTTGCCAGAAGAAGGTATAAAAGCAACATGGCTATATGGTGATATCAGGGGATTGAAGTCGGATCATGTGTATGTATGGTATGATCCATTACACTGTGACAGCATTCTCAAATATTATAAACAGTCAAAAGTTTGTTTTGAGTTCTGTGTTGCAAATGATAAGGGGGAAGTTGACGGTTCCATCTTTATTAAAGAGTGTGGGGTAGGGCTTGTAAATGTTTTAGAAATGCATAGTGTTTTACAAGAGTTGGACTTTGATTCGGATAAGAAAAAGGAGTTGGTGGAGGGAGTGGAGTCTGAATCAAAGCATAGGAAGCTAGATTGGAGTGAATCAAGCTCTTCAGATAGTCTAACAACTCCAAGGAGCTCCTCTGAGTCAGACTCAGAGATTGTTAAACCAGTTTCAGCTGAAAATGGTAAATCTACTCACAAGGAAACCAAAACTGATTCTGGAACAAGTGTGCATGTGTATCTATCTTTTTGGGTTTACTTTCTTGTTGATTCCTTTTTTTCTCATGCTCATAATTTTCTTCTATGTTTACTCATACAATCAGAGGTAGTAGAGATGATTGAGCTAGAGAACACTGAATCTACTTGCAAGGAAACCCTGAGCACTGCTGAAAGAGGTCCCAAAGAAAAATCTAGAGAGTCTACAGAAATTGTGGCCGATGAACATTTACAGAGCACATCTCTTCAAGCCTCTTCCCAAGGGGGCTCTGAGCACTTGCATGATAGGTTAGAAGAATCAAATAAGCAAGTTGTAGAAACTTATGATACAGAGAAATTTGTTACTAAATACTCGTACTTTGACCTTGAGAGTTGCCTCCAACAGTTGGATGAAAATCCATTTGCAATCCTTGACTTACTCTCTAATGAGCTATCCCCTCCTCTCAAACAATCAGAAACTTGTGTTCAAAAGGTAGCTCAAGCAAATGATGCTACAACCGTCCTCGATGAATTCCGAACCTTAGTGTTCTCAACTTCAATGCTAGAGAAACTTCCAGACCAATCCTATCGGCAACAAATTGAAGAATCACTACGAAAACTTCACACTTATCGTAGAGAAATTACGAAAGAGCAAGAAGGTGTAGACAAATTTATCGAACTCTACGATAAAGCTGCCAACATTTCTCAAGAAAAGATGCTAACCGAGAATAAACAAACAAAACTGGCATCTAAGAAGAGAAACTTGTATAACAAACTTCAAGATTCTAAACTGAAAGTTCAACAGTTTGACACTGCCATCTCAACTAATAAGTTAGAGATTGAAAACCTCCAAAAGAGACAAAGGGAAATCCAGGAAGCTATAAATAAGATTCAACAAGAAAATGAAGCCTTGGAAAAGGAGAGGTCAGCACTAGAGGTTTTATACTCAGAAAAACAAACCAAGAAGAATGAAATACTTGAATTAGTGAAGCATATCTCGACTTCTGTTGTTTACACAACCAAACAATTAGAAGAACTTGAAGAGAAAAGATTGAGTTTGGCTTCAGCTTACGAAGACCTCAAAGAGCCATATGGAAGAATGAAGACAAAGCCCCCATTTTAG 4134 0.3827 MGPSLIKTRLSLARSRQCQPKSSSTHVDSSLFQLRDEAQVIQNLVNDVLQKLHLRYPTELNGLVRIKNTCAKVDLLLRKSRVIGIWGMGGIGKSTIAKALFAKYFPYFDHVCFMANANEFSLDKLFSELFREEVSASNVVGSTFDMRRLKRKRIFIVLDDMDCLDLLEYLCREYQNLDPNSKLIITTRDKQLLEGRVDQIYEVKKWETRASLKLFCLEAFKKRHPKRGFESLSESAVEYAGGVPLALKVLGSYLRSKGINFWESTIRKLSMYPNERIQKVLEVTYIGLHDLEKNIFLDIVFFFKEKQKDHVITILDACGFEATSGIEILADKALLTISYRKIIHMHDLLQQMGLEIVRQESSGDPGRRSRLKDKEAREVIEENKGTSAIQGIALDLSQIKGLILHADTFTKMKTLRFLKFYNKLGQSARDTYLDLPATLEPFSDKLRYIEWIGYPFESLPSPFCAKVLVEIHMPHSKVKQLWQGIQELNYLEGINLRQCKQFEELPDLSKAPRLKWVNLSCCESLLYLHPSVLSSGTLVTLILDKCTNLKSVKSEKHLKSLEKISVNGCLNLVEFAVSSDLIENLDLSNTGIQMLGTSIGSMHKLKSLNLEGLKLKPVLKELSCLTSLKVLKISDNGLVIDKQQIHVLFSGLRYLQILYLKDCSKLFELPDNINLLTQLQELRLDRSDLKRLPENIKNLQVLEILSLEDCKELLCLPTFPSLIKYLRVINCTSLVSVSNLKTLAIEMLGMTKRTTFKNSGKLDEDSLRIIMESLHLTMMSAAYHNVLVRKTYGTYNSCNYTSVELCLPGGSVPEQIHYRSTQSSITIVLPPRSELLGFIYSVVLSPAGGKKTFGTKIFCKCHLPEEGIKATWLYGDIRGLKSDHVYVWYDPLHCDSILKYYKQSKVCFEFCVANDKGEVDGSIFIKECGVGLVNVLEMHSVLQELDFDSDKKKELVEGVESESKHRKLDWSESSSSDSLTTPRSSSESDSEIVKPVSAENGKSTHKETKTDSGTSVHVYLSFWVYFLVDSFFSHAHNFLLCLLIQSEVVEMIELENTESTCKETLSTAERGPKEKSRESTEIVADEHLQSTSLQASSQGGSEHLHDRLEESNKQVVETYDTEKFVTKYSYFDLESCLQQLDENPFAILDLLSNELSPPLKQSETCVQKVAQANDATTVLDEFRTLVFSTSMLEKLPDQSYRQQIEESLRKLHTYRREITKEQEGVDKFIELYDKAANISQEKMLTENKQTKLASKKRNLYNKLQDSKLKVQQFDTAISTNKLEIENLQKRQREIQEAINKIQQENEALEKERSALEVLYSEKQTKKNEILELVKHISTSVVYTTKQLEELEEKRLSLASAYEDLKEPYGRMKTKPPF 1377
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02985 1377 PRINTS Disease resistance protein signature 240 254 - -
Vimu11g02985 1377 PRINTS Disease resistance protein signature 697 713 - -
Vimu11g02985 1377 PRINTS Disease resistance protein signature 148 162 - -
Vimu11g02985 1377 PRINTS Disease resistance protein signature 82 97 - -
Vimu11g02985 1377 Pfam Leucine Rich Repeat 468 486 IPR011713 -
Vimu11g02985 1377 Gene3D - 45 200 IPR027417 -
Vimu11g02985 1377 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 576 IPR044974 GO:0006952
Vimu11g02985 1377 Gene3D Ribonuclease Inhibitor 580 759 IPR032675 -
Vimu11g02985 1377 Gene3D Ribonuclease Inhibitor 367 579 IPR032675 -
Vimu11g02985 1377 MobiDBLite consensus disorder prediction 1062 1111 - -
Vimu11g02985 1377 MobiDBLite consensus disorder prediction 1085 1101 - -
Vimu11g02985 1377 MobiDBLite consensus disorder prediction 967 1010 - -
Vimu11g02985 1377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 299 IPR027417 -
Vimu11g02985 1377 Coils Coil 1277 1328 - -
Vimu11g02985 1377 Gene3D - 207 289 IPR042197 -
Vimu11g02985 1377 MobiDBLite consensus disorder prediction 1067 1084 - -
Vimu11g02985 1377 Pfam NB-ARC domain 79 275 IPR002182 GO:0043531
Vimu11g02985 1377 MobiDBLite consensus disorder prediction 973 993 - -
Vimu11g02985 1377 SUPERFAMILY L domain-like 345 736 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu11g02985 Vimu-Chr11 49491528 49500474 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02985 81 945 WRKY Transcription Factor Family AT5G45050 28.541 3.44e-76 275
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02985 - - vun:114165831 2290