LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu11g02985	ATGGGTCCTAGTCTGATCAAGACTAGGTTAAGCTTAGCTCGATCAAGACAATGTCAACCTAAGTCAAGCTCAACCCATGTTGATTCGAGTTTGTTCCAGCTTAGAGATGAAGCTCAGGTCATCCAGAATCTTGTCAATGATGTATTGCAAAAGCTACACCTAAGATATCCTACGGAACTAAATGGCTTAGTCAGAATTAAAAATACTTGTGCAAAGGTGGATTTGTTACTGCGAAAATCTCGAGTCATTGGAATTTGGGGTATGGGGGGAATTGGCAAGTCAACCATTGCTAAAGCCTTGTTTGCCAAATACTTTCCCTATTTTGATCATGTCTGCTTCATGGCCAATGCAAATGAATTTTCGCTTGATAAGCTTTTCTCTGAGCTATTCAGAGAGGAAGTTTCCGCATCAAATGTGGTAGGATCAACATTTGATATGAGGAGACTCAAAAGGAAAAGGATTTTCATTGTACTTGATGATATGGATTGTTTAGACCTATTGGAATATTTATGTAGAGAGTATCAGAACCTAGATCCCAATAGTAAACTCATCATAACAACACGTGATAAGCAATTGCTTGAGGGAAGAGTTGATCAGATCTATGAGGTCAAGAAATGGGAAACCAGAGCATCTTTAAAGCTTTTTTGCTTAGAAGCATTCAAGAAAAGACATCCCAAAAGGGGTTTTGAGAGTCTCTCAGAAAGTGCAGTTGAATATGCTGGTGGTGTTCCATTAGCTCTTAAAGTTTTGGGTTCATATCTTCGTTCAAAAGGTATCAATTTTTGGGAAAGTACTATAAGAAAACTCAGCATGTATCCTAACGAGAGAATTCAGAAAGTGTTAGAAGTGACCTACATTGGATTACATGATCTTGAAAAGAATATATTCCTAGACATTGTATTTTTTTTCAAAGAAAAACAGAAAGATCATGTCATAACAATACTAGATGCCTGTGGTTTTGAAGCAACTAGTGGAATAGAAATTCTCGCAGACAAAGCTTTGTTAACAATTTCATATAGAAAGATAATACACATGCATGACTTGCTGCAACAAATGGGTTTGGAGATTGTTCGTCAAGAGAGTAGTGGGGATCCTGGTAGACGTAGTCGATTGAAGGATAAAGAAGCTCGCGAAGTGATTGAAGAAAACAAGGGAACTAGTGCTATTCAAGGCATAGCATTAGATCTGTCTCAAATTAAAGGTTTAATTTTGCATGCTGATACATTCACAAAAATGAAAACCTTGAGATTTCTGAAATTCTACAACAAATTGGGTCAGAGTGCCAGAGATACATACCTTGACCTTCCTGCAACTCTCGAGCCATTTTCTGATAAACTGAGGTACATTGAGTGGATTGGATACCCGTTTGAGTCTCTTCCATCACCTTTTTGTGCTAAGGTTCTTGTTGAGATTCACATGCCACACAGCAAAGTAAAACAACTTTGGCAGGGGATCCAGGAGCTTAATTATTTAGAAGGAATTAACCTAAGACAATGCAAGCAGTTTGAGGAGCTTCCGGATTTGTCTAAGGCACCGAGACTTAAATGGGTGAATCTCTCCTGCTGTGAAAGTTTGCTCTATCTTCATCCATCTGTTTTATCCTCAGGCACCCTTGTTACTTTGATACTGGATAAGTGTACAAACCTCAAGAGTGTTAAAAGTGAGAAACATTTAAAATCTCTTGAAAAGATCAGTGTCAATGGCTGCTTAAATCTGGTGGAATTTGCAGTTTCGTCCGATTTAATTGAAAATTTGGATTTAAGCAATACAGGAATCCAAATGTTGGGCACATCAATAGGGAGTATGCATAAACTTAAGTCGCTCAATCTGGAGGGCTTAAAACTCAAGCCTGTTTTAAAAGAGCTATCTTGCTTGACATCGCTCAAGGTGCTGAAGATTTCTGATAATGGACTAGTTATTGACAAACAGCAAATACATGTCCTGTTTAGTGGATTAAGGTACTTACAAATACTATATTTGAAAGATTGTAGTAAGTTGTTTGAACTCCCCGACAACATCAATCTCTTAACACAATTACAAGAACTAAGGTTAGACAGGAGTGATTTGAAAAGGTTGCCCGAAAACATTAAGAATCTTCAAGTGTTGGAAATTCTGTCCCTGGAGGATTGCAAGGAGCTTCTTTGCCTGCCAACGTTTCCATCCCTCATCAAGTATTTACGTGTCATTAACTGCACATCATTGGTGTCAGTGTCAAACTTAAAGACTTTGGCAATAGAAATGTTGGGAATGACAAAACGCACTACATTCAAGAATAGCGGGAAATTGGATGAAGATTCACTCAGAATTATTATGGAAAGCCTCCATTTAACAATGATGAGTGCTGCATATCACAATGTGTTAGTAAGAAAAACATATGGGACGTACAACAGCTGCAACTATACGAGTGTTGAGCTTTGTTTACCCGGAGGGAGTGTCCCTGAGCAGATTCATTATCGATCCACTCAGTCCTCCATTACCATTGTACTTCCTCCACGTTCTGAATTACTGGGCTTCATTTACTCAGTGGTTCTTTCTCCAGCTGGTGGAAAGAAGACTTTTGGCACTAAGATATTTTGTAAATGCCACTTGCCAGAAGAAGGTATAAAAGCAACATGGCTATATGGTGATATCAGGGGATTGAAGTCGGATCATGTGTATGTATGGTATGATCCATTACACTGTGACAGCATTCTCAAATATTATAAACAGTCAAAAGTTTGTTTTGAGTTCTGTGTTGCAAATGATAAGGGGGAAGTTGACGGTTCCATCTTTATTAAAGAGTGTGGGGTAGGGCTTGTAAATGTTTTAGAAATGCATAGTGTTTTACAAGAGTTGGACTTTGATTCGGATAAGAAAAAGGAGTTGGTGGAGGGAGTGGAGTCTGAATCAAAGCATAGGAAGCTAGATTGGAGTGAATCAAGCTCTTCAGATAGTCTAACAACTCCAAGGAGCTCCTCTGAGTCAGACTCAGAGATTGTTAAACCAGTTTCAGCTGAAAATGGTAAATCTACTCACAAGGAAACCAAAACTGATTCTGGAACAAGTGTGCATGTGTATCTATCTTTTTGGGTTTACTTTCTTGTTGATTCCTTTTTTTCTCATGCTCATAATTTTCTTCTATGTTTACTCATACAATCAGAGGTAGTAGAGATGATTGAGCTAGAGAACACTGAATCTACTTGCAAGGAAACCCTGAGCACTGCTGAAAGAGGTCCCAAAGAAAAATCTAGAGAGTCTACAGAAATTGTGGCCGATGAACATTTACAGAGCACATCTCTTCAAGCCTCTTCCCAAGGGGGCTCTGAGCACTTGCATGATAGGTTAGAAGAATCAAATAAGCAAGTTGTAGAAACTTATGATACAGAGAAATTTGTTACTAAATACTCGTACTTTGACCTTGAGAGTTGCCTCCAACAGTTGGATGAAAATCCATTTGCAATCCTTGACTTACTCTCTAATGAGCTATCCCCTCCTCTCAAACAATCAGAAACTTGTGTTCAAAAGGTAGCTCAAGCAAATGATGCTACAACCGTCCTCGATGAATTCCGAACCTTAGTGTTCTCAACTTCAATGCTAGAGAAACTTCCAGACCAATCCTATCGGCAACAAATTGAAGAATCACTACGAAAACTTCACACTTATCGTAGAGAAATTACGAAAGAGCAAGAAGGTGTAGACAAATTTATCGAACTCTACGATAAAGCTGCCAACATTTCTCAAGAAAAGATGCTAACCGAGAATAAACAAACAAAACTGGCATCTAAGAAGAGAAACTTGTATAACAAACTTCAAGATTCTAAACTGAAAGTTCAACAGTTTGACACTGCCATCTCAACTAATAAGTTAGAGATTGAAAACCTCCAAAAGAGACAAAGGGAAATCCAGGAAGCTATAAATAAGATTCAACAAGAAAATGAAGCCTTGGAAAAGGAGAGGTCAGCACTAGAGGTTTTATACTCAGAAAAACAAACCAAGAAGAATGAAATACTTGAATTAGTGAAGCATATCTCGACTTCTGTTGTTTACACAACCAAACAATTAGAAGAACTTGAAGAGAAAAGATTGAGTTTGGCTTCAGCTTACGAAGACCTCAAAGAGCCATATGGAAGAATGAAGACAAAGCCCCCATTTTAG	4134	0.3827	MGPSLIKTRLSLARSRQCQPKSSSTHVDSSLFQLRDEAQVIQNLVNDVLQKLHLRYPTELNGLVRIKNTCAKVDLLLRKSRVIGIWGMGGIGKSTIAKALFAKYFPYFDHVCFMANANEFSLDKLFSELFREEVSASNVVGSTFDMRRLKRKRIFIVLDDMDCLDLLEYLCREYQNLDPNSKLIITTRDKQLLEGRVDQIYEVKKWETRASLKLFCLEAFKKRHPKRGFESLSESAVEYAGGVPLALKVLGSYLRSKGINFWESTIRKLSMYPNERIQKVLEVTYIGLHDLEKNIFLDIVFFFKEKQKDHVITILDACGFEATSGIEILADKALLTISYRKIIHMHDLLQQMGLEIVRQESSGDPGRRSRLKDKEAREVIEENKGTSAIQGIALDLSQIKGLILHADTFTKMKTLRFLKFYNKLGQSARDTYLDLPATLEPFSDKLRYIEWIGYPFESLPSPFCAKVLVEIHMPHSKVKQLWQGIQELNYLEGINLRQCKQFEELPDLSKAPRLKWVNLSCCESLLYLHPSVLSSGTLVTLILDKCTNLKSVKSEKHLKSLEKISVNGCLNLVEFAVSSDLIENLDLSNTGIQMLGTSIGSMHKLKSLNLEGLKLKPVLKELSCLTSLKVLKISDNGLVIDKQQIHVLFSGLRYLQILYLKDCSKLFELPDNINLLTQLQELRLDRSDLKRLPENIKNLQVLEILSLEDCKELLCLPTFPSLIKYLRVINCTSLVSVSNLKTLAIEMLGMTKRTTFKNSGKLDEDSLRIIMESLHLTMMSAAYHNVLVRKTYGTYNSCNYTSVELCLPGGSVPEQIHYRSTQSSITIVLPPRSELLGFIYSVVLSPAGGKKTFGTKIFCKCHLPEEGIKATWLYGDIRGLKSDHVYVWYDPLHCDSILKYYKQSKVCFEFCVANDKGEVDGSIFIKECGVGLVNVLEMHSVLQELDFDSDKKKELVEGVESESKHRKLDWSESSSSDSLTTPRSSSESDSEIVKPVSAENGKSTHKETKTDSGTSVHVYLSFWVYFLVDSFFSHAHNFLLCLLIQSEVVEMIELENTESTCKETLSTAERGPKEKSRESTEIVADEHLQSTSLQASSQGGSEHLHDRLEESNKQVVETYDTEKFVTKYSYFDLESCLQQLDENPFAILDLLSNELSPPLKQSETCVQKVAQANDATTVLDEFRTLVFSTSMLEKLPDQSYRQQIEESLRKLHTYRREITKEQEGVDKFIELYDKAANISQEKMLTENKQTKLASKKRNLYNKLQDSKLKVQQFDTAISTNKLEIENLQKRQREIQEAINKIQQENEALEKERSALEVLYSEKQTKKNEILELVKHISTSVVYTTKQLEELEEKRLSLASAYEDLKEPYGRMKTKPPF	1377

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu11g02985	1377	PRINTS	Disease resistance protein signature	240	254	-	-
	Vimu11g02985	1377	PRINTS	Disease resistance protein signature	697	713	-	-
	Vimu11g02985	1377	PRINTS	Disease resistance protein signature	148	162	-	-
	Vimu11g02985	1377	PRINTS	Disease resistance protein signature	82	97	-	-
	Vimu11g02985	1377	Pfam	Leucine Rich Repeat	468	486	IPR011713	-
	Vimu11g02985	1377	Gene3D	-	45	200	IPR027417	-
	Vimu11g02985	1377	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	33	576	IPR044974	GO:0006952
	Vimu11g02985	1377	Gene3D	Ribonuclease Inhibitor	580	759	IPR032675	-
	Vimu11g02985	1377	Gene3D	Ribonuclease Inhibitor	367	579	IPR032675	-
	Vimu11g02985	1377	MobiDBLite	consensus disorder prediction	1062	1111	-	-
	Vimu11g02985	1377	MobiDBLite	consensus disorder prediction	1085	1101	-	-
	Vimu11g02985	1377	MobiDBLite	consensus disorder prediction	967	1010	-	-
	Vimu11g02985	1377	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	73	299	IPR027417	-
	Vimu11g02985	1377	Coils	Coil	1277	1328	-	-
	Vimu11g02985	1377	Gene3D	-	207	289	IPR042197	-
	Vimu11g02985	1377	MobiDBLite	consensus disorder prediction	1067	1084	-	-
	Vimu11g02985	1377	Pfam	NB-ARC domain	79	275	IPR002182	GO:0043531
	Vimu11g02985	1377	MobiDBLite	consensus disorder prediction	973	993	-	-
	Vimu11g02985	1377	SUPERFAMILY	L domain-like	345	736	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu11g02985	Vimu-Chr11	49491528	49500474	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu11g02985	81	945	WRKY Transcription Factor Family	AT5G45050	28.541	3.44e-76	275

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu11g02985	-		-	vun:114165831	2290