Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02964 ATGCTAATTCAGTCTTGGTTTCTATCTGTGACTTCTCTTCATATTTTACTTCAAAAGTTGTTTTCTGGGAGATCTACCATCCATCAATTTGCTTTTCCGTCTCATGTTATATGTAGAACTCAGTGTAACTTTATATCTAAATTTACTTTAGCAGGGGCTGCTAGGTCAATGCCTCGCGGGATCAGGTCAGGTTCTGGATCACAGTCTTTCAATTCTGGAACAATAACATACACAGGGTCTGCTAAGATTTTTACTTTGAATGACTTAGAGAAAGCAACAAATAACTTTGATTCTTCAAGAATATTAGGAGAAGGTGGTTTTGGACTTGTTTACAAAGGTGTTCTAAATGATGGGAGGGATATAGCCGTGAAGGTTCTCAAAAGAGATGATCAGCGTGGTGGTCGTGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGTCTACATCATCGAAATTTAGTTACATTGTTTGGTATATGCATAGAGAAACATACTCGTTGCTTAGTTTATGAGCTTGTCCCTAATGGAAGTTTGGAGTCCCACTTACATGGTAAACAAAAGTGCAGTTTTAAAAAATTGTCATTACTGTTGGAAGTAAAAAAATATCAGTTTTTGGAATCTGACTATTGA 627 0.3684 MLIQSWFLSVTSLHILLQKLFSGRSTIHQFAFPSHVICRTQCNFISKFTLAGAARSMPRGIRSGSGSQSFNSGTITYTGSAKIFTLNDLEKATNNFDSSRILGEGGFGLVYKGVLNDGRDIAVKVLKRDDQRGGREFLAEVEMLSRLHHRNLVTLFGICIEKHTRCLVYELVPNGSLESHLHGKQKCSFKKLSLLLEVKKYQFLESDY 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02964 208 SUPERFAMILY Protein kinase-like (PK-like) 68 187 IPR011009 -
Vimu11g02964 208 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Vimu11g02964 208 FunFam receptor-like serine/threonine-protein kinase ALE2 69 171 - -
Vimu11g02964 208 Gene3D Phosphorylase Kinase; domain 1 68 171 - -
Vimu11g02964 208 SMART tyrkin_6 96 208 IPR020635 GO:0004713|GO:0006468
Vimu11g02964 208 PANTHER OS01G0750732 PROTEIN 55 187 - -
Vimu11g02964 208 ProSiteProfiles Protein kinase domain profile. 96 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g02964 208 Pfam Protein tyrosine and serine/threonine kinase 99 191 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02964 Vimu-Chr11 49322112 49322738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02964 51 188 Receptor kinase-like Gene Family AT5G56890 67.391 1.15e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vimu11g02964 PK_Tyr_Ser-Thr 1.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02964 - - gmx:100814040 246.128