Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02951 ATGGACAATATTTTGATCGTGTCTGTGACAGTGTTTCTCTTATGCACTGTGATCCTCCTCTACAGGAACAGGCTCAGCCTCATGCTCAAATCAAAATATAGAAATAAACTTCCATCAGGCACTCTTGGATGGCCTTTTATCGGTGAAACTCTTGAGTTTGTTTCTTGTGCTTACTCTGATCGCCCTGAGAGCTTCATGGACAAGCGACGCCGCGTGTATGGCAAGGTGTTTAAGTCACACATATTTGGAAGCCCCACGATTGTTTCCACGGATGCTGATGTGAACAAGTTCATACTGCAAAGTGATGCAAAAGTTTTTGTTCCTTCTTATCCCAAGTCTCTTACTCAGTTGATGGGAGAGTCTTCTATTTTGCTCATCAATGGAAGCCTTCAAAGGAGAATACATGGACTTATTGGAGCTTTCTTCAAGTCTCAACAGCTAAAGGCTCAGATCACCAGAGATATGCAAAAGTATGTCAAAGAATCAATGTCTAGTTGGAAAGAGGACTGCCCCGTATACATACAAGACGAAACAAAAAAGATTGCTTTTCATGTACTAGTCAAGGCACTGATTAGTTTGGATCCAGGACAAGAAATGGAACTTCTGAAGAAACATTTTCAGGAATTTATCTCTGGCCTCATGTCTCTACCAATAAATCTACCAGGAACTAAGCTTTATCAATCTTTGCAGGCAAAGAAGAAAATGGTGAAATTAGTGCGGAGAATTATCCTAGCTAAAAGAAATAGTGGCATTTGCAGAGTTCCAAAAGATGTGGTGGATGTGCTTCTCAATGATGCAAGTGAAAAAATGACAGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCTGGGGAAGACTCAGTGCCAGTTCTTATGACTCTAGCTACAAAATATCTATCAGAATGTCCAGCTGCTTTGCAGCAATTGACGGAGGAAAATATGAAGCTTAAGAAAATTCAAGATCAGGTTGGTGAGTCCTTGTGTTGGAGTGATTACCTATCATTGCCATTTACTCAAACAGTCATCACTGAAACTCTCAGAATGGGAAATATCATAATTGGAGTAATGAGAAAGGCCTTAAGAGATGTTGAAATAAAAGGGAACTTAATACCAAAAGGGTGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGACAGAAACTATGACTGTCCATATCAGTTCAATCCATGGAGGTGGCAAGACAAAGATATGAGCAGTTGTAATTTCACTCCTTTTGGAGGGGGACAAAGGCTTTGCCCAGGCCTTGACTTGGCCAGGCTGGAAGCTTCCATCTTCCTACATCACTTTGTCACTCAATTCAGATGGCATGCTGAAGCAGATGCAATAGTGAACTTTCCCACAGTAAGAATGAAAAGGAGGATGCCTGTGATGGTAAGGAGAGTGGAATCTTAA 1425 0.4028 MDNILIVSVTVFLLCTVILLYRNRLSLMLKSKYRNKLPSGTLGWPFIGETLEFVSCAYSDRPESFMDKRRRVYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLTQLMGESSILLINGSLQRRIHGLIGAFFKSQQLKAQITRDMQKYVKESMSSWKEDCPVYIQDETKKIAFHVLVKALISLDPGQEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKLVRRIILAKRNSGICRVPKDVVDVLLNDASEKMTDDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPAALQQLTEENMKLKKIQDQVGESLCWSDYLSLPFTQTVITETLRMGNIIIGVMRKALRDVEIKGNLIPKGWCVFANFRSVHLDDRNYDCPYQFNPWRWQDKDMSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWHAEADAIVNFPTVRMKRRMPVMVRRVES 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02951 474 CDD CYP90-like 69 471 - -
Vimu11g02951 474 Pfam Cytochrome P450 38 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02951 474 SUPERFAMILY Cytochrome P450 32 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02951 474 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 28 472 - -
Vimu11g02951 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Vimu11g02951 474 PANTHER CYTOCHROME P450 26 35 453 - -
Vimu11g02951 474 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02951 474 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02951 474 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02951 474 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02951 474 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02951 474 Gene3D Cytochrome P450 28 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02951 Vimu-Chr11 49245768 49249924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02951 36 445 Cytochrome P450 AT3G13730 67.711 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02951 K12638 - gmx:100782687 861.292