Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02922 ATGTTAGGTTTGGCAAACAAGAAAACTGTTACCGTTCAGCCTGTTGGTAAGGATCTATCTGTTTTGTTGGCTACAACTAAGACAAAGAAGCAGAACAAGCCTGCTTCGTTGCTCCACAAATCTGTGATGAAGAAGGAGTTCCGTAGGATGGCAAAGGCTGTTGAAAATCAGGTTGCGGATAATTACTACAGGCCTGATCTTAAGAAGGCTGCCCTTGCAAGGTTGAGTGCTGTTAACAGAAGCCTCAAAGTTGCCAAGTCTGGTGTCAAGAAGAGGAACAGACAGGCCGTGAAGATCTCTGGTAGGAAGTGA 312 0.4519 MLGLANKKTVTVQPVGKDLSVLLATTKTKKQNKPASLLHKSVMKKEFRRMAKAVENQVADNYYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQAVKISGRK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02922 103 PANTHER 60S RIBOSOMAL PROTEIN L28 3 103 IPR002672 GO:0003735|GO:0005840|GO:0006412
Vimu11g02922 103 Gene3D - 1 87 - -
Vimu11g02922 103 Pfam Ribosomal L28e protein family 3 81 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02922 Vimu-Chr11 49004469 49007995 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02922 3 96 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 73.404 4.65e-44 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02922 K02903 - gmx:100500189 181.8