Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02906 ATGATGAACATTGCACTTCTTGTTCAACTCTTTGCATTTTCCTTCCTTAGTTGTGTGTATGCACAAGACACCCTTGTGCCTGCCATCTTTACATTTGGTGATTCTGCTGTGGATGTAGGAAATAATAACTATCTTCCCACGATTTATAAGGCTGATTACCCTCCCTATGGGAGAGACTTTGTTAACCACCAACCAACTGGGAGGTTTTGCAATGGCAAATTAGCTACTGATATCACTGCTGAGACGTTGGGTTTTAAGACCTATGCTCCTGCATATCTTAGCCCACAGGCGTCAGGGAAAAACCTCCTTATTGGAGCAAACTTTGCTTCTGCTGCATCTGGTTATGATGAAAATGCTGCTATTTTGAATCATGCAATTCCATTGTCCCAACAGTTAAGTTATTTCAAGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGCAGTCAAAAGGCAGCCTCAATTATCAAAGATGCATTGTACGTGCTCAGTGCTGGCAGCAGCGACTTTGTGCAAAACTATTACGTCAATCCTTGGATCAACAAAGTATACACACCTGACCAGTATGGCTCCTTCTTAGTTGGTTCGTTCAACAGTTTTGTTAAGGACTTGTATAGATTGGGAGCCAGGAGACTTGGAGTGACTTCACTTCCCCCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACTCTGATGCCCAAGCGTTTAATAAGAAGATCAACTCAGCTGTAGCAAATCTTCAAAAGCAACTTCCGGGTCTCAAGATTGCTGTTTTTGACATTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATCTGGTTTTGTGGAGGCAAACAGAGGTTGCTGTGGTACCGGGACTGTGGAGACAACATCCTTGTTGTGCAATCCAAAATCACCTGGAACTTGTTCTAATGCCACCCAGTATGTGTTCTGGGATAGTGTCCATCCTTCACAAGCAGCTAACCAAGTTCTAGCTGATTCATTAATTATCCAAGGCATAAGTCTTATCACATAA 1056 0.4299 MMNIALLVQLFAFSFLSCVYAQDTLVPAIFTFGDSAVDVGNNNYLPTIYKADYPPYGRDFVNHQPTGRFCNGKLATDITAETLGFKTYAPAYLSPQASGKNLLIGANFASAASGYDENAAILNHAIPLSQQLSYFKEYQGKLAKVAGSQKAASIIKDALYVLSAGSSDFVQNYYVNPWINKVYTPDQYGSFLVGSFNSFVKDLYRLGARRLGVTSLPPLGCLPAARTLFGFHENGCVSRINSDAQAFNKKINSAVANLQKQLPGLKIAVFDIYKPLYDLVQSPSKSGFVEANRGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADSLIIQGISLIT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02906 351 PANTHER GDSL ESTERASE/LIPASE EXL3 14 342 - -
Vimu11g02906 351 FunFam GDSL esterase/lipase APG 19 347 - -
Vimu11g02906 351 SUPERFAMILY SGNH hydrolase 29 342 - -
Vimu11g02906 351 Gene3D SGNH hydrolase 17 346 IPR036514 -
Vimu11g02906 351 CDD SGNH_plant_lipase_like 27 343 IPR035669 -
Vimu11g02906 351 Pfam GDSL-like Lipase/Acylhydrolase 29 341 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02906 Vimu-Chr11 48900380 48901949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02906 25 342 Acyl Lipid Metabolism Gene Families AT4G10950 32.500 3.54e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02906 - - vun:114167332 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02906 11 48900380 48901949 Vimu11g02906 11 48900380 48901949 ECH
Vimu4g00291 4 2024519 2026225 Vimu11g02906 11 48900380 48901949 PCT