Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02874 ATGAACGCAAACATGGCTTCCCTTTTGAGTGTGCTCTGTGTTGTGTTGGCCGTGATGAATAGCGCAGCCAAAATAGCAGCTAGGGAATTCAAGGTGGGTGGAGACATGGGTTGGCATGAACCTTCCCCCAACGACACTGCATTTTATAATCAATGGGCTTCAACCAACAGGTTTCAAGTTGGTGATTCTCTGGTTTTTGAGTACCAGAATGACTCGGTTGTGAATGTGGAGAGATGGGAATACTTCCACTGTGACTCAAACAACCCCATCAGTGCATTTGATGATGGGAACAGCACAGTGATTCTTGGCAGCCCTGGGATGTTCTACTTCATCAGTGGAACTGAAGATCAATGCCAGAAAGGGGAGAAGTTGATGGTAGAAGTCATGTCACCCCGCTCAGTTCCGTCACAAGCTTTCTCACCATTGCCTCTTTCTCACCATAGTCATGGCTCAAGGGTTTCTGATTCCATGCTGTCTAGCTTCAGTTTTTTCTTCTGTTTTCTTCTTCTGCTAACTGTGATCAACTAG 528 0.4602 MNANMASLLSVLCVVLAVMNSAAKIAAREFKVGGDMGWHEPSPNDTAFYNQWASTNRFQVGDSLVFEYQNDSVVNVERWEYFHCDSNNPISAFDDGNSTVILGSPGMFYFISGTEDQCQKGEKLMVEVMSPRSVPSQAFSPLPLSHHSHGSRVSDSMLSSFSFFFCFLLLLTVIN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02874 175 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
Vimu11g02874 175 SUPERFAMILY Cupredoxins 27 129 IPR008972 -
Vimu11g02874 175 Pfam Plastocyanin-like domain 45 121 IPR003245 GO:0009055
Vimu11g02874 175 Gene3D - 26 134 IPR008972 -
Vimu11g02874 175 PANTHER BLUE COPPER PROTEIN 26 136 IPR039391 GO:0009055
Vimu11g02874 175 FunFam Early nodulin-like protein 1 27 133 - -
Vimu11g02874 175 CDD OsENODL1_like 28 129 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02874 Vimu-Chr11 48641565 48642537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02874 6 157 Phytocyanin Superfamily AT1G79800 44.079 3.04e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02874 - - vun:114166188 278.485