Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02838 ATGAAGAGGTTACAAATGACGAGTTTAAAAAAACTGTGCATGAGGGAGGATGGTAAGCAACAAGTTTGCATTGTTGGTTTGCAAGAGTACCAAGTATCGGATGTAGAGACCATCAAGGAACTGATTGAGCAAGGAAATGCCACAAGAAGTACTGGCACCACAGGTGCAAACGAGGAGTCGTCACGGTCACATGCAATTCTTCAGCTTGCTATCAAGAGATCAGTTGATGGGAATGTATCCAAGCCCCCCCGTGTTGTTGGGAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACCACAGATAATGACAAACAGACAAGGTATGTCTCACGGAGTGGCTAA 354 0.4548 MKRLQMTSLKKLCMREDGKQQVCIVGLQEYQVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNVSKPPRVVGKLSFIDLAGSERGADTTDNDKQTRYVSRSG 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02838 117 Gene3D Kinesin motor domain 3 116 IPR036961 -
Vimu11g02838 117 MobiDBLite consensus disorder prediction 97 117 - -
Vimu11g02838 117 ProSiteProfiles Kinesin motor domain profile. 1 117 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g02838 117 Pfam Kinesin motor domain 8 109 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g02838 117 ProSitePatterns Kinesin motor domain signature. 87 98 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vimu11g02838 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 109 IPR027417 -
Vimu11g02838 117 PANTHER KINESIN-RELATED PROTEIN 6 10 111 IPR027640 GO:0003777|GO:0007018
Vimu11g02838 117 PRINTS Kinesin heavy chain signature 54 71 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g02838 117 PRINTS Kinesin heavy chain signature 88 106 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02838 Vimu-Chr11 48404505 48408849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02838 11 99 Calmodulin-binding Proteins AT5G65930 41.573 2.36e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02838 K10393 - gmx:100802651 200.29