Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02823 ATGATACAGAATGGTTGCATTATATCCCAAGGGTGTGCCCCTGTGAATTCTAGGTCACGCAATCATGTCGTACCCGGCAGCTCCGTGGTTCGATGCGCTTCTCGAATGTCTGCTAAGGTTGCCGCCTCAAACATCCGGAGCTTTTCGCGACATAATTTAGAATGTAAATCCTCGTTTCCAAGAGGAATGACATTTTCAAACGTGTTTGCTGCATCAAGCTTACGTTTAAGTGAGGGTCAAAATATTCTCTTTCGCTCTTTCCCTGGGTTACCCAAATTAGCCAAGTCCAATATGGTCCCAAGAGCATCAAAGGATGTCCCAACTAGCTTCCGTTACCCTCCAATGACCAAAAAACCGCAATGGTGGTGGAGATCATTAGCATGCCTACCTTACCTTATGCCTCTCCATGAGACATGGATGTATGCTGAGACAGCATATAATCTTCATCCATTCTTGGAATGCTTTGAATTCTACACGTACCCTTTTCTTATGGCAATTGGGAGCTTGCCTAGCTGGTTTCTCATGGCATACTTCTTTGTTGCATATCTTGGAATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATTTCATGTCGTGATGGGAATGTTATTGGAGATTGCCCTGCAGGTTATAGGAACTGTGAGCCGCTGGATGCCACTATCACTCTACTGGGGCAAAATGGGAATGCATTTCTGGACTGCCGTATCATTTGGTTATCTCTTTACTGTTTTGGAGTGCATAAGGTGTGCTCTTGTTGGTATGTATGCTGACATTCCTTTCATCTGTGATGCAGCATATATCCAAATTCCATATGATTAA 822 0.438 MIQNGCIISQGCAPVNSRSRNHVVPGSSVVRCASRMSAKVAASNIRSFSRHNLECKSSFPRGMTFSNVFAASSLRLSEGQNILFRSFPGLPKLAKSNMVPRASKDVPTSFRYPPMTKKPQWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFLMAIGSLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSLYWGKMGMHFWTAVSFGYLFTVLECIRCALVGMYADIPFICDAAYIQIPYD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02823 273 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 12 273 IPR005691 -
Vimu11g02823 273 Pfam Chloroplast import apparatus Tic20-like 95 266 IPR005691 -
Vimu11g02823 273 NCBIfam Tic20 family chloroplast protein importer 1 273 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02823 Vimu-Chr11 48316639 48318240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02823 88 273 Chloroplast and Mitochondria Gene Families AT4G03320 41.799 1.69e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02823 - - gmx:100818669 522.316