Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02766 ATGGGGAGAAGATTGCGGTACCTTCACCAGCAAGCAACACCACATATCATCCACAGGGATATTAAATCAAGCAATGTGTTGCTGGATTCTGATTTCAAGGCCAGGATTGCTGATTTTGGGTTTGCTAAGTTGATCCCTGATGGGGCAACACATGTGACTACAAAAGTTATGGGAACTCGTGGCTATCTTGCACCAGAATATGCCATGTTAGGTAAAGCAAAAGCGAGTTGTGATGTCTACAGTTTTGGTGTTCTCCTTCTAGAACTCGCTAGTGGGAGAAGACCAGCCAAAATGCTTAATTCCACGGTGAGGAGATCGATAGTTGATTGGGCATTGCCATTGGTCTGTGAGAAGAAATTTAGTGAAATTGCTGATCCAAGATTAAATGGTAACTATGTGGAGGAAGAGCTTAAAAGAGTTGTTTTAGTTGCTCTTATGTGTGCTCAGGATCTGCCTGAGAAGAGACCAACCATGCTTGATGTGGTAGAACTACTCAAAGGAGAGTCTAAGGATAAATTTTCTCATATAGAGAACAGTGACATGTTCAGAAGTCGTCTTGCTGCTGATGGAACTTCAGTGGCTGAAGATAGTTTAGACTACATCTCAGACGAAAATAAATTTGAACATCCGCTGAGAAAGAATGCTTCGTGTTTTTTTGGTATTGTTGCAATTTTCAAGTCAAGACTCCAAGCCCTTTTTTAG 702 0.4145 MGRRLRYLHQQATPHIIHRDIKSSNVLLDSDFKARIADFGFAKLIPDGATHVTTKVMGTRGYLAPEYAMLGKAKASCDVYSFGVLLLELASGRRPAKMLNSTVRRSIVDWALPLVCEKKFSEIADPRLNGNYVEEELKRVVLVALMCAQDLPEKRPTMLDVVELLKGESKDKFSHIENSDMFRSRLAADGTSVAEDSLDYISDENKFEHPLRKNASCFFGIVAIFKSRLQALF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02766 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 16 28 IPR008271 GO:0004672|GO:0006468
Vimu11g02766 233 SMART serkin_6 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g02766 233 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g02766 233 SUPERFAMILY Protein kinase-like (PK-like) 5 165 IPR011009 -
Vimu11g02766 233 Gene3D Transferase(Phosphotransferase) domain 1 1 183 - -
Vimu11g02766 233 Pfam Protein kinase domain 4 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g02766 233 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 5 178 - -
Vimu11g02766 233 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02766 Vimu-Chr11 47936366 47938471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02766 3 165 Receptor kinase-like Gene Family AT3G58690 48.485 3.02e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Vimu11g02766 Pkinase 3.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02766 - - vum:124844621 400.208