Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02764 ATGGCAACGGCGACATACCCTCCACCGCCACCTTTTTACAGGCTTTACAAGGATTACTTGCAAGACCCTAAGTCTGCTCCCGAGCCTCCGCCGCCTATTGAAGGGACTTACGTTTGTTTTGGAGGCAATTACACGACTAGTGATGTTCTACCAAGCTTGGAAGAACAAGGGGTGCGCCAGCTCTATTCTAAGGGGCCTAATGTTGATTTCAAGAAGGAGCTGAGGTCACTCAATGGAGAGTTGCAACTACATGTCCTGGAGCTTGCTGATATTCTTATTGAGAGACCCTCACAGTATGCAAGGAGAGTTGAAGAAATTTCTACTGCGAGAGCAACTCTGATTCACATTTTGGAACTTCAGATACAACGCCGTAAACAGGCAGTGGAGGACATAAAAAGGAGGAGAGAAGAAGCACGACGGCTCCTTAACGAGTCCTTGGCAACACTTGATGGTCATTAG 459 0.4749 MATATYPPPPPFYRLYKDYLQDPKSAPEPPPPIEGTYVCFGGNYTTSDVLPSLEEQGVRQLYSKGPNVDFKKELRSLNGELQLHVLELADILIERPSQYARRVEEISTARATLIHILELQIQRRKQAVEDIKRRREEARRLLNESLATLDGH 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02764 152 Coils Coil 114 148 - -
Vimu11g02764 152 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 109 152 IPR009244 GO:0003712|GO:0006357|GO:0016592
Vimu11g02764 152 Gene3D - 60 109 IPR044888 -
Vimu11g02764 152 SUPERFAMILY Mediator hinge subcomplex-like 66 143 IPR037212 GO:0016592
Vimu11g02764 152 Pfam MED7 protein 4 108 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Vimu11g02764 Med7 3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02764 K15148 - gmx:100792250 263.848