Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02741 ATGGCAGCAAAGACGGTGTGCGTGACTGGTGCTGGAGGATTCGTGGCGTCTTGGCTTGTTAAGCTTCTTCTCTCCAAAGGTTACAATGTCCATGGAACAGTGAGAGAACCCGCAGGTAGTAAGAAATATGAGCACTTGCAGAAACTGGAAGGAGCTTCTGAAAACCTCACACTCTTCAAGGCAGATCTCTTGAATTACGAATCTATTCTCTCAGCAATTGCTGGATGCACTGCTGTTTTTCATGTCGCAAGTCCTGTACCCTCAACCATTGTTCCCAACCCTCAGGCAAGCCTAATCATCTACTTCTTCAACGTAGAAGTGATTGAACCTGCTGTGCAAGGAACCACTAACGTACTTCAAGCTTGTCTTGAAACTAAAGTACAACGAGTTGTCTATGTCTCATCGGTATCTGCTATTAGCATTCGCCCAAATATGCCTAAAGATAAAGTGATTGATGAGTCCTATTGGTCTGATAAAGATTACTGCAAAAAAACTCAGTATACTGTTTTATTTTGGTTAAGTTGCAAAAATGTCAAGTTTCAGTCATCGAGAATGGTTATGAACTGGTACTGTTATTCAAAGACAGAGGCAGAGGAGCAGGCCCTGGACTTTGGAAAAAGAACTGGCCTTGATGTGTCAACCACTGTCAATGCAAGTAGCTTGGTTCTCCCCAAACTTTTGAAAGGTGGTGACTCATTTGAAAATAAGACCCGTTGGATAGTCGATGTACGGGATGTAGTTGATGCAATACTTTTGGTGTACGAGAAGCCTGAGGCAGAACGGAGATACATATGCACTGCACACACCATCAAGACACGGGATTTGGTAGAGAAACTGAGGAGTATATATCCAAGCTACAAGTACCCTTCCAACTTCACTGAGGTGGATGATTACTTAAGGTTCAGCTCAGATAAACTTGAAAGGTTGGGTTGGAAATACAGGTCGCTGGAGGAAACACTCATTGATTCTGTTGAGAGCTATCGAGAGGCTGGGCTCCTACAATTCGAATAA 1011 0.4332 MAAKTVCVTGAGGFVASWLVKLLLSKGYNVHGTVREPAGSKKYEHLQKLEGASENLTLFKADLLNYESILSAIAGCTAVFHVASPVPSTIVPNPQASLIIYFFNVEVIEPAVQGTTNVLQACLETKVQRVVYVSSVSAISIRPNMPKDKVIDESYWSDKDYCKKTQYTVLFWLSCKNVKFQSSRMVMNWYCYSKTEAEEQALDFGKRTGLDVSTTVNASSLVLPKLLKGGDSFENKTRWIVDVRDVVDAILLVYEKPEAERRYICTAHTIKTRDLVEKLRSIYPSYKYPSNFTEVDDYLRFSSDKLERLGWKYRSLEETLIDSVESYREAGLLQFE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02741 336 CDD FR_SDR_e 6 311 - -
Vimu11g02741 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 329 IPR036291 -
Vimu11g02741 336 Gene3D - 1 336 - -
Vimu11g02741 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 324 - -
Vimu11g02741 336 FunFam Dihydroflavonol reductase 3 335 - -
Vimu11g02741 336 Pfam NAD dependent epimerase/dehydratase family 6 260 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02741 Vimu-Chr11 47712839 47717370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02741 6 333 Monolignol Biosynthesis Gene Families AT2G33590 51.594 2.69e-117 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02741 - - gmx:100784817 468.774