Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02715 ATGTCTCTAAAGATAGCAGCAGAAGTTTATCCAAAATCACCATCAGAGACAGTGATGGAGCCATTGATTGTGGTAAACGAATATGATGAAGATAGACACAAGGTGGCAGTAGAGAAACTCGAGAGGCTTTGTGAAGTTGGGCAGAGTGGAAAGCCATCTCTTGTCACTGACCTCATGGGAGACCCCATATGCCGTATCCGTCACTTTCAGTTGCATGTCATGCTGGTTGCAGAATATGGAGAAGGAGGAGAAGTTGTTGGGGTGATAAGAGGTTGTGTAAAAACAGTTACAAGAGGGAATTCGGTTTATGTAAAACTGGCCTATATTTTGGGGCTCAGAGTCTCCCCTCGACACAGGAGATTTGGCATTGGCACAAAACTAGTCGAACATTTAGAAGAATGGTGCAAGCAAAAAGGGGCTAAGTATGCATATATGGCAACTGATTGTACCAATGAGCCTTCAGTGAATCTGTTCACAAAAAAATGTGGCTACTCAAAGTTCAGGACTCTAACCATACTGGTGCAACCTGTACATGCTCACTACAAACCAATCAGCTCCAATGTTGCCGTGCTTCGCCTTCCACCACGCCTTGCAGGCTCCATGTACGACCAGTTGTTTGCCAATTCAGAATTTTACCCTAAAGACAAAGACTCGATCTTGTGCAACAAGCTGAATCTGGGGACTTTCATGGCCATCCCCAAGAAGTACCTATCCAAGTGTGATCCAAAAAGGGGCATTCTCCCTCCAAGCTATGCCATACTGAGCGTGTGGAACACCAAAGATGTGTTCAAACTGCAAGTAAAGGGTGTGTCACCATTGGCACATGCCTGCTGCGTAGGTACGAGGTTGTTGGATGAATGGATGCCATGGCTAAGGCTACCTTCGTTTCCAGATGTTTTCAGGCCATTTGGGGTTTATTTTTTGTATGGACTGCACATGGAAGGAAAGTGTGGTGCTCAACTGATGAAGTGCTTATGTGCATTTGTGCATAACATGGGAAGAGATGGTGGTGGTTGTGGGGCCATTGTGGCTGAACTGGGCCAAAGGGACCCAGTCAGAGACGTAGTCCCACATTGGAGAAAATTCTCATGGGCAGAGGACATGTGGTGTATAAAGAATCTTCACAAGGGTTCATCTCAACATTCTGATTGGTTTACTTCTAGATCCTCTTTGCCAGTTATATTTGTTGATCCTCGAGACTTTTGA 1206 0.4527 MSLKIAAEVYPKSPSETVMEPLIVVNEYDEDRHKVAVEKLERLCEVGQSGKPSLVTDLMGDPICRIRHFQLHVMLVAEYGEGGEVVGVIRGCVKTVTRGNSVYVKLAYILGLRVSPRHRRFGIGTKLVEHLEEWCKQKGAKYAYMATDCTNEPSVNLFTKKCGYSKFRTLTILVQPVHAHYKPISSNVAVLRLPPRLAGSMYDQLFANSEFYPKDKDSILCNKLNLGTFMAIPKKYLSKCDPKRGILPPSYAILSVWNTKDVFKLQVKGVSPLAHACCVGTRLLDEWMPWLRLPSFPDVFRPFGVYFLYGLHMEGKCGAQLMKCLCAFVHNMGRDGGGCGAIVAELGQRDPVRDVVPHWRKFSWAEDMWCIKNLHKGSSQHSDWFTSRSSLPVIFVDPRDF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02715 401 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 70 170 IPR016181 -
Vimu11g02715 401 CDD NAT_SF 74 144 - -
Vimu11g02715 401 Pfam Acetyltransferase (GNAT) family 74 164 IPR000182 GO:0016747
Vimu11g02715 401 FunFam Putative N-acetyltransferase HLS1 38 169 - -
Vimu11g02715 401 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016747
Vimu11g02715 401 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 20 401 - -
Vimu11g02715 401 Gene3D - 30 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02715 Vimu-Chr11 47573262 47575472 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu11g02715 Acetyltransf_1 2.6e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02715 - - gmx:100802670 764.607