Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02709 ATGAAAGGCTCATGGAAACTCCGATGTGCCCTCTTGCTACTCATCTCCGCCGTAGCCACCGCCACCGACCACATTGTCGGTGCCAATCGTGGGTGGAACCCTGGCCTCAACTACACTCTCTGGGCCAACAACCACACTTTCTACGTCGGCGACCTTATCTCATTCAGGTACCAGAAAAACCAATACAATGTGTTTGAGGTGAACCAAACTGGGTATGACAACTGCACCACTGAAGGGGCGGTGGGAAATTGGAGCAGTGGAAAGGATTTCATACCCCTGAATAAGGCCAAGAGATATTACTTCATCTGTGGAAATGGCCAATGCTTCAGTGGAATGAAGGTGTCTGTTATCGTGCATCCTCTTCCTCCACCTCCCACCTCTGCAATTTCTGCTGAACATTCAACGTCACACTCTGCTTCTCCTCTGCTTTTCAAACGCTCTCTGTTGCTGTCTTCTCTTTTCGCTTGCTTTGGATTTCTCTTGATGTAG 489 0.4908 MKGSWKLRCALLLLISAVATATDHIVGANRGWNPGLNYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVIVHPLPPPPTSAISAEHSTSHSASPLLFKRSLLLSSLFACFGFLLM 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02709 162 FunFam Lamin-like protein 20 121 - -
Vimu11g02709 162 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Vimu11g02709 162 Gene3D - 20 121 IPR008972 -
Vimu11g02709 162 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
Vimu11g02709 162 CDD Phytocyanin_like_1 22 118 - -
Vimu11g02709 162 PANTHER BLUE COPPER PROTEIN 20 128 IPR039391 GO:0009055
Vimu11g02709 162 Pfam Plastocyanin-like domain 32 112 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02709 Vimu-Chr11 47548459 47549238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02709 19 128 Phytocyanin Superfamily AT5G15350 46.429 2.46e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02709 - - vum:124835852 338.191