Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02678 ATGCAAGGAGCGAGAAGGAAGGCGTTGCAGTTTGATTCCTTTAAGAAGCGTAAATTGTTGTTTGGGTGTTTGAAAAGGCAATTCAAAATTCAGCGACCGGGTTCAGGGGCTGACTTGCCCCAACTAGGTGGTGAGTACAACCCTTATTCTGTAGCGCGGAGGGTGAGTTCCACCCATTCCATAATGATGGAAAATGACATGGAGAGCGGTACGTTGGGTCTGGGGGCTTACCCGGACAAGCCCAGAGTTTTCCCAAACATGCGCACTAAACCTTACACCCCTCTGATATTTCGGATTCTGCTCAGTATAAATGTTCGTGTCCTGTTCGTTATTTTACTCCTTGGGCTGGGTGCTATCTTTTACGTGGGAGCCAGTACCTCTCCAATTATAGTGTTTGTCATCTCTGTTTGCATTCTCAGCTTCCTTGTTGCCATTTATCTTATAAAGTGGGTGCTCGCAAAAGATGAGGGACCTCCTGAAATGGTTCAGATAGCAGATGCTATACGAGATGGAGCTGAAGGATTTTTCAAGACCCAGTATGGTAGCATATCCAAGATGGCCATATTGCTTGCTGTTGTTATTCTATGCATATATTTGTTTCGCAGTACATCTCCTCAACAGGAATCTTCTGGCCTGGGGAGGTCAACTTCTGCATACATCACTGTAGCTGCTTTCCTTTTAGGTGCCCTTTGTTCAGGTATTGCTGGATATGTAGGGATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTTTCTAGTGCTGCAAGAAGGTCTGCAAGAGAAGCATTGCAGGTAGCTACTCGTGCAGGTGGTTTATCTGCCCTCATTGTTGTCGGTATGGCTGTAATAGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACTCACCTGGTTCAATGAAGGTTACTGATTTACCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTTGCTCTTTTTGCCCAGTTGGGTGGTGGAATATACACAAAAGCAGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCTAGAAATCCTGCTGTTATTGCTGATCTGGTTGGTGACAATGTGGGAGATTGTGCTGCTCGAGGTGCTGATCTCTTTGAAAGTATTGCCGCTGAAATAATCAGTGCCATGATACTTGGTGGAACAATGGCCCAACGTTGTAAAATTGCAGGCAAATACTTGAATCCATCGGGCTTCATCTTGTTTCCTCTTGTTGTTCATTCCTTCGATTTGGTGGTATCATCAGTTGGAATATTTTCTATTCGGGGAACACGTGAAACTGGATTAATGGCTCCAGTGGAGGATCCGATGACAATTCTTCAAAAGGGATATTCTTTTACGATAGTCTTAGCTGTTCTGGCATTTGGTTTGTCTACCCGCTGGTTACTTTACACTGATCAAGCACCTTCAGCATGGTTCAATTTTGCCTTGTGTGGGTTGATTGGTATTATCACTGCATACATTTATGTCTGGATTGCCAAGTATTATACTGACTACAAGCATGAGCCTGTACGCATATTAGCCCTTTCCAGCTCCACTGGCCATGGGACTAATATAATTGCTGGAGTCAGTTTGGGTCTGGAATCTACTGCTCTTCCTGTCCTTGTCATCAGTGTGTCAATTATCTCAGCTTTCTGGCTGGGTCAGACCTCTGGACTAGTAGACGAATCAGGAACCCCAACTGGTGGGTTGTTTGGCACTGCTGTGGCAACGATGGGAATGCTAAGCACTGCTGCCTATATTCTTACTATGGATATGTTTGGCCCAATAGCCGATAATGCAGGAGGAATTGTGGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATAACGGATGTCCTTGATGCTGTAGGAAACACGACCAAAGCTACCACCAAAGGCTTTGCTATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGTGCTTATATGGACGAAGTTTCTGCTTTTGCTCATGAACCTTTTAAACAGGAATCAAGAGGGGCGGAATGGAGGACAGAAGTCCTTCGAGTGTTATTTGGAATTAAGGTTGATATTGCAATTCCCGAAGTTTTCGTTGGTGGTTTGCTAGGTTCCATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTTCTGCAGTTGGCAGGACTGCACAAGAGGTTGTTAATGAAGTGAGAAGGCAGTTCATTGAGAGGCCGGGTATAATGGATTACAAGGAAAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCATCATTAAGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTGTAGTCGGTTTTGTATTCCGAATTTTGGGCTACTATACAGGGCAACCTTTACTCGGGGCTAAAGTGGTGGCTGCTTTGCTCATGTTTGCAACAGTGACTGGTATTCTTATGGCACTTTTTCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATTGAGACTGGAGCTCTTGGAGGGAAGGGAAGTGAAGCTCACAAAGCAGCCGTAACAGGAGATACATCCATTCAAAGACACAGCTGGTCCTTCAATCCATGTCCTTATAAAGATGCTGGCAACGATTACGCTGGTAATGGCTCCAATCTTCCTAAGCTCCAAGAATTCTATAAGAACACGGTGGTGATCTTTCTTGAGAGAGATTCAGAGGGAAGAGCCATTTGCGCACACTGTTTGATCAACATCTACACAAAGAAGGCTTGGCAACCTGTGAAGCGTGCTGTGATATGCTTGGCATCCTGTGAAGAGTGCTGGTTACACGTTGAGGATTGTTCGACGTGGGTGCAAATTGTAGAAGAAGGGATTCTTGCTGCAATTTTGCTTTTTGTGTGTTCAGCTATATTTTGTGTGTGA 2913 0.4473 MQGARRKALQFDSFKKRKLLFGCLKRQFKIQRPGSGADLPQLGGEYNPYSVARRVSSTHSIMMENDMESGTLGLGAYPDKPRVFPNMRTKPYTPLIFRILLSINVRVLFVILLLGLGAIFYVGASTSPIIVFVISVCILSFLVAIYLIKWVLAKDEGPPEMVQIADAIRDGAEGFFKTQYGSISKMAILLAVVILCIYLFRSTSPQQESSGLGRSTSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQVATRAGGLSALIVVGMAVIGIAVLYATFYVWLGVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIAGKYLNPSGFILFPLVVHSFDLVVSSVGIFSIRGTRETGLMAPVEDPMTILQKGYSFTIVLAVLAFGLSTRWLLYTDQAPSAWFNFALCGLIGIITAYIYVWIAKYYTDYKHEPVRILALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIISAFWLGQTSGLVDESGTPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAHEPFKQESRGAEWRTEVLRVLFGIKVDIAIPEVFVGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVVGFVFRILGYYTGQPLLGAKVVAALLMFATVTGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAVTGDTSIQRHSWSFNPCPYKDAGNDYAGNGSNLPKLQEFYKNTVVIFLERDSEGRAICAHCLINIYTKKAWQPVKRAVICLASCEECWLHVEDCSTWVQIVEEGILAAILLFVCSAIFCV 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02678 970 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 127 896 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vimu11g02678 970 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 154 855 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vimu11g02678 970 Pfam Inorganic H+ pyrophosphatase 138 855 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vimu11g02678 970 NCBIfam V-type H(+)-translocating pyrophosphatase 132 855 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02678 Vimu-Chr11 47360145 47374982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02678 61 855 Primary Pumps ATPases AT1G16780 83.396 0.0 1344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02678 K23025 - gmx:100784465 1368.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02678 11 47360145 47374982 Vimu11g02678 11 47360145 47374982 ECH