Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02665 ATGATGTTGGAAGTGGAGGTAATCTCCAAAGAAATCATCAAACCCTCTTCTCCAACCGAGGACCATGTTCGTCATTACCAACTCTCTTTTCTCGATCAAGTTTCTCCCATGGTATATAACCCTATAGTTCTCTTTTACTCTTGCGACGGTATCACTCAATTCAACAGAACCACCATTTCCGAAAAGCTCAAGAAATCTTTGTCTGATGTTTTAACCCATTTCAACCCGCTTGCCGGGCGACTCAACGGCAACAGTACTTTTATAGAATGCTACGACGAGGGTGTTCCCTACTTAGAAGCAAGAGTGAAGTGCAAAGTTGTAGACGTTATTAGCAAACCAGTTCCGGGAGAACTCAACCGTTTGGTTCCATTTCTACTACATGATGTCACCAGCATCACATTTGGTGTTCAACTTAATGTTTTTGATTGCGGTGGCATCGCAATCGGAGCTTGCCTTTCACACCAGATCGCAGACGGACTGTCATTTTTCACGTTCCTCAATTGTTGGGCAGCCATTGCTAGGGAGGGAAGTGTGTTGCCAAATCCACAGTTTATTTCAGCTAAACTCTTCCCACCGAAAAATATATCTGGGTTTGACCCTCGAAGTGGCATCGTGAAGGAGAACATCATCTGCAAGATGTTTGTGTTTGACGGTTTTGTTGTTGAAAATCTTAGAGCAAGATATGCAGCAGGTGCTACTCGAGTGGAGGCCTTATCTGTTTTCATCTGGAGTCGGTATGTGGCTGTCACTAGAAAGCAATCTCTTCCACAGAGAACATATGCTGTGATTCACGCAGTGAACCTTCGTCCAAAGATGGAACCACCACTTCCTCCAGACTCCTTTGGCAACTACTACCGAATCACTATGACAACTTCGTCTTTTAACACCGAAGAGGAGTGTCATGATCTTGATCTAGCGAAACAGGTAAGGGATCAGATAAAGAAGATTGACAAAGATTATGTGAGAAAACTCCAAGATGGAAACGAGCATTCTAATTTCCTGAAGGATATTTCATTTAGAGTGCTTGAGAAGGGGGAACTATTTGTGAGGTTTCCTTTGTACGACTCTGATTTTGGATGGGGAAAACCAACATGGGTAGGTTCACCCGCTTTAACTTTCAAAAATCTGGTTGTGCTTATAGACGCAAAGAATGGCGGCGGCATAGAGGCTTATGTTAGCTTAAAGGTGGAGGACATGGCGAAGTTCGAGGCAGATGAGGAGTTGTTTGCCTTGGTGAACACACCACGGGCTTCTTCATTCATGCGTGCAATGTAA 1275 0.4392 MMLEVEVISKEIIKPSSPTEDHVRHYQLSFLDQVSPMVYNPIVLFYSCDGITQFNRTTISEKLKKSLSDVLTHFNPLAGRLNGNSTFIECYDEGVPYLEARVKCKVVDVISKPVPGELNRLVPFLLHDVTSITFGVQLNVFDCGGIAIGACLSHQIADGLSFFTFLNCWAAIAREGSVLPNPQFISAKLFPPKNISGFDPRSGIVKENIICKMFVFDGFVVENLRARYAAGATRVEALSVFIWSRYVAVTRKQSLPQRTYAVIHAVNLRPKMEPPLPPDSFGNYYRITMTTSSFNTEEECHDLDLAKQVRDQIKKIDKDYVRKLQDGNEHSNFLKDISFRVLEKGELFVRFPLYDSDFGWGKPTWVGSPALTFKNLVVLIDAKNGGGIEAYVSLKVEDMAKFEADEELFALVNTPRASSFMRAM 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02665 424 Gene3D - 206 410 IPR023213 -
Vimu11g02665 424 PANTHER F21J9.9 6 408 - -
Vimu11g02665 424 Gene3D - 1 197 IPR023213 -
Vimu11g02665 424 Pfam Transferase family 4 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02665 Vimu-Chr11 47298168 47299462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02665 3 403 Monolignol Biosynthesis Gene Families AT5G48930 27.002 4.61e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02665 K13065 - gmx:102670206 666.381