Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02662 ATGGAAGGGAGAGTTAGCGCATTGGAGAGAGTGGTAGAGGAACTAAGGGAGGAATCCAGAGGAAATTTCCAAGAACTTAAAGATTTGATGAAAGAAATGTTGCAGAAATCCAAGAATCACAGAAAGGGCTTAGAAGGAAGTGAGAAATCTGCCATGAAAGGAAAGAAAGAGGGAAAAAAAAGTCTGCAAACCATCAAGAAAGGCAAGAAATTCTCTGAAGAAGGAGAGTTCTTGGCTAAGGATGAAGAGAGGAAGGAAGAAAGATATCCACAAAGTAGTAAACCATATGAGGAGGGAGAGAAATTGTTGAGGTCTGGGGTTAAAATAGTGGTGTTAGGGAGCGACCCAGTTGAGGTCTTGGTGTCCATGGGTGCATCCACTATAGCAGTTACATATCCATATCCTGAAATTCCTGATGTTAGAACACCTGCAGATCTTGCTTCTAGCAATGGCCACAAAGGAATTTCCAGTTTTCTTGCAGAGTCTTTATCAACTAGCCATCTTGAATTACTCACAATGGAGGAAGGTAAAGATGGTAGGAAAGAAACTTTGGGAAGGGAAGCAATGCAAACAGTTTCAGAGCAAATTGACACTTGTGCTTTATGGGGATATACCAGATGTTATTTGCCTTAA 633 0.4107 MEGRVSALERVVEELREESRGNFQELKDLMKEMLQKSKNHRKGLEGSEKSAMKGKKEGKKSLQTIKKGKKFSEEGEFLAKDEERKEERYPQSSKPYEEGEKLLRSGVKIVVLGSDPVEVLVSMGASTIAVTYPYPEIPDVRTPADLASSNGHKGISSFLAESLSTSHLELLTMEEGKDGRKETLGREAMQTVSEQIDTCALWGYTRCYLP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02662 210 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 117 198 - -
Vimu11g02662 210 MobiDBLite consensus disorder prediction 34 97 - -
Vimu11g02662 210 Coils Coil 12 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02662 Vimu-Chr11 47289242 47289896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02662 117 195 CAMTA Transcription Factor Family AT5G09410 53.165 6.05e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02662 K21596 - gmx:100795682 98.2117