Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02646 ATGTACCTTATTTTTCCTTCATACGATATAAATCCATGTTACATTCACGGGTGTCTCTCAAGTGGGTTTGACTCATCATCATCAACCCAACAACGCGGCCAACCTCTGGTCAAACCACTCATGGAGCCCTGCATCTTCATCATACTCTCTCTCTGTTTCTGCGTCCTCCTAACAAGACGCTTCTTCTTCTCCCGTCGCATCAAACCCACCACCCCTCCTGGCCCTTCACACATACCAATCATCTCAACCATCCTATGGCTCACAAAATCCTTTCAAATCGAACCAATTCTCCGAACCCTCCACGCCAAATACGGTCCCATTCTCACCCTCCACATTGCTGCTACTCCCGTCGTCTTCGTACGCGACCGCTTTCTCGCCCACCAAGCCCTCGTCCAAAATGGTTCCCTTTTCTCCGATCGCCCCAAGGCCCTGGCCGTCGCCAAAATCATAACCACCCACCAACACAACATTAGCTCCGCCTCCTATGGCGCCACCTGGCGCACCCTCCGCCGCAACCTCACCTCCCAGATGCTCCACCACTCCCGCGTCAAGTCCTTCTCCGAGATCCGCACCTGGGTCCTCCACACCCTCCTCACGCACCTCAAATCCCAATCCCAATCCAACAATTCTGTCAGAGTCATCGACCACTTCCAATACTCCATGTTCTGCTTGCTCGTCTTCATGTGCTTCGGGCAACGACTCGACGATGGCAAAGTCAGAGACATCGAGCGCGTGCAGCGCCAGATGCTTCTGCGCTTTAGAAGCTTCAACGTCCTCAATTTCTGGCCCAAAGTCACGCGCGTTTTGTTCCGCAAACACTGGGAAGACTTGCTGAGGCTTCGGAAGGAGCAAGAGGCTGTTCTGGTTCCGCTTATAAGAACCAGGAAGCAAAAGCAAAAGCAAGGCAAGGAGGAAGGTGTTGTTTCGTATGTTGATACTTTGTTGGATTTGCAGTTGCCTGAGGAGAAACGCAAGCTCAACGAAGAGGAACTTGTGACGCTGTGTAATGAGTTTTTAAACGCGGGCACGGATACGACTTCCACTGCGTTGCAGTGGATCATGGCAAATTTGGTGAAGTACCCGCATGTGCAGGAGAGGGTGGTGGCTGAGATAAGGGAGGTATTGGGTGAGAGAGAAGAGAGGGAAGTGAAAGAGGAGGAGTTGCAGAAACTGCCTTATCTGAAAGCTGTGGTTTTGGAGGGTTTGAGGCGTCACCCACCGGGGCACTTTGTGCTGCCGCATTCAGTGACTGAGGACGTGGTTTTGAATGATTACTTTGTCCCTAAGAATACGACAGTGAACTTTATGGTGGCAGAGATGGGGTGGGATCCAAAGGTATGGGAGGATCCAATGGCGTTCAAGCCAGAGAGGTTTATGAATGATGAGGGGTTTGATATTACTGGGAGTAAAGAGATCAAGATGATGCCATTTGGTGCTGGGAGGAGGATTTGCCCTGGCTATAATCTGGCATTGCTTCATTTGGAATACTTTGTGGCCAATTTGGTTTCGAATTTTGAGTGGAAGGTTGCAGAGGGTGGGGATGTGGATTTGTCAGAGAAACAAGAGTTTACTGTGGTAATGAAAAATGCATTGAAAGTTCATCTTTCTCCAAGAATCTAG 1620 0.5019 MYLIFPSYDINPCYIHGCLSSGFDSSSSTQQRGQPLVKPLMEPCIFIILSLCFCVLLTRRFFFSRRIKPTTPPGPSHIPIISTILWLTKSFQIEPILRTLHAKYGPILTLHIAATPVVFVRDRFLAHQALVQNGSLFSDRPKALAVAKIITTHQHNISSASYGATWRTLRRNLTSQMLHHSRVKSFSEIRTWVLHTLLTHLKSQSQSNNSVRVIDHFQYSMFCLLVFMCFGQRLDDGKVRDIERVQRQMLLRFRSFNVLNFWPKVTRVLFRKHWEDLLRLRKEQEAVLVPLIRTRKQKQKQGKEEGVVSYVDTLLDLQLPEEKRKLNEEELVTLCNEFLNAGTDTTSTALQWIMANLVKYPHVQERVVAEIREVLGEREEREVKEEELQKLPYLKAVVLEGLRRHPPGHFVLPHSVTEDVVLNDYFVPKNTTVNFMVAEMGWDPKVWEDPMAFKPERFMNDEGFDITGSKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVSNFEWKVAEGGDVDLSEKQEFTVVMKNALKVHLSPRI 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02646 539 Pfam Cytochrome P450 72 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 SUPERFAMILY Cytochrome P450 72 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS E-class P450 group I signature 125 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 Gene3D Cytochrome P450 64 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 51 529 - -
Vimu11g02646 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Vimu11g02646 539 CDD CYP77_89 103 532 - -
Vimu11g02646 539 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02646 539 FunFam Cytochrome P450 family protein 65 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02646 Vimu-Chr11 47060391 47062709 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02646 46 538 Cytochrome P450 AT1G64940 56.607 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02646 K24184 - gmx:100795683 768.074