LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu11g02640	ATGCAACCTCCATCGATCAGGACTCAGCTTTTGGTTCTTATATTTAGGCGCCTTATCTACAACAGCACTGGTCATTCTGGTGGAAAGGTGATGCAAGAAGGAGCACTGATGGAAGCCTGGTTCATCATCCTAGTGTCTGCGTGCGTATGCGTTATCGTAAGAGCAATATTTTCACTTCAAACAAAAACCATCAACACCCCTCCAGGCCCTCTTCACATCCCAATCGTCACAAGCATCCAATGGCTCCTCAAATCCTTCAGCCAACTCGAGCCGATTCTCCGAAACCTCCACGCCAAGTTCGGTCCCATCGTCACCATCCGCATCGGATCTAGTCGAGCCATATTCATCGCCGACCGCACCCTCGCCCACCAAGCCCTCGTCCAAAAAGGTTCCCTCTTCTCCGACCGCCCCAAGGCTCTCGCCGCCTCCAAAATCCTCACCAGCGACCAACGCAACATCAGCTCCGCCTCCTACGGTCCCACGTGGCGTATCCTCCGCCGAAACCTTACCTCCGAGGTGCTCCACCACTCACGCGTTAAGTCCTTCTCCGAGATCCGCAACTGGGTCCTCCAAGCCCTCCTCGCTCGCCTTAAATCTGATTCTCAATCCAACGATTCCATCAGAGTTATCGATCATTTCCGGTACTCCATGTTCTGCTTGCTCGTCTTCATGTGCTTCGGGGAGCGACTCGATGAGGGCAAAGTCAGAGACATCGAGCGCGTCCAACGGCAGTTACTTCTAGGGTTTACAAGGTTTAACATCCTTAATTTCTGGCCCAAAGTCACCCGCGTTTTGCTCCGCGAACGTTGGGAGGAGATGCTTAGGTTTCGCCAAGAGCTAGAGGACGTGATGGTTCCACTTATAAGAGCCAGGAAGCAAAAGCAAGGCAAGGATGAAGGTGTTGTTTCGTATGTTGATACTTTGTTGAATTTGCAGTTGCCCGAGGAGAAACGCAAGCTCAACGAAGAGGAGATTGTGACGCTGTGTAGTGAGTTTATGGACGGGGGCACAGACACGACTTCTACGGCGCTGCAATGGATCATGGCGAATTTGGTGAAGTACCCGCAGGTGCAAGAGAGGTTGGTGAGTGAGATAAGGGAGGTAATGAGTGGGAGAGAAGACAGAGAAGTGAAAGAAGAAGAGTTGCAAAAATTTCCTTATCTGAAGGCTGTGATTTTGGAGGGTTTGAGGCGTCACCCACCTGGCCATTTTGTGTTGCCACATGCAGTGAGTGAGGACGTGGTTTTGAATGATTACTTGATCCCTAAGAATGGGACAGTGAATTTCATGGTGGCAGAGATGGGGTGGGACCCAAAGGTATGGGAGGATCCAATGACGTTTAAGCCAGAGAGGTTTATGAATGATGAGGTGTTTGACATTACTGGAAGTAAAGAGATAAAGATGATGCCGTTTGGTGCTGGGAGAAGGATTTGCCCCGGCTATAATCTGGCTTTGCTTCATTTGGAGTACTTTGTGGCTAATCTGGTTTGGAATTTTGAGTGGAAGGTTCCAGAGGGAGGAGATGTGGATTTGTCAGAGAAACAAGAGTTCACTCATGAAGAAGACGAACCTAGTTGTGTAAGAAAGCACTCATGGTGGTTGGTGGAGGCAAGCAGCGGCGCGATTCTAGTTGGAGAAAATCATGGCCCTGGAGCTTTGCACGACGACAACAAGGATTGTCGCGTTGACATTGAAACTCTCGATTTGGATGATTCATGGCTGATGCGAGAGATCGTGACTTTGATGGTGGTGGCCATGGAGGTTGCGTGTGATGGTTGCCATGGTTCTCTGTTGGCATGGCTTCATGACGGCATGATGTCTTTGAACGATCTTTGTGGCGGCGATGGCGGGTTCGGTGGACTAAATGTTGAAGAAGATGGTGACGTGGCAGTAGCTAAATGTCATCTTAACACTGTTGTACACACCTGGATTGGTTTAATCCAACTTGGGCTTGAAGATGCATCCCTCTTCGTCTTCGTCATGCAGTGGGTGGCGGAAGCAAGACACTGCTTCGCAACGGCGGTGATAACAGTTGTTCGTCATCACACAACCGTCGCTTCCAGTCGACGGTGGCGGAACACAAACTACGCCGTTTCAACTCCCTCATACTCGTTTTCCACCTCGTCTCCTTATCCTTCTCCCTTGCCTCCTCCGTCTTCGTGCTCACCAACACTCGTAGCTCAGATACACCTCATTGGTACCACTATGACACCTTCAGGTACTCTTATTATTTGCAAGTTTATTTATCTTAAATGTTATAATTACGCTTTTTACACAATTCTATATTATTTTCTTATTGATTTTCCAACTATTACTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGTGATATAG	2394	0.4749	MQPPSIRTQLLVLIFRRLIYNSTGHSGGKVMQEGALMEAWFIILVSACVCVIVRAIFSLQTKTINTPPGPLHIPIVTSIQWLLKSFSQLEPILRNLHAKFGPIVTIRIGSSRAIFIADRTLAHQALVQKGSLFSDRPKALAASKILTSDQRNISSASYGPTWRILRRNLTSEVLHHSRVKSFSEIRNWVLQALLARLKSDSQSNDSIRVIDHFRYSMFCLLVFMCFGERLDEGKVRDIERVQRQLLLGFTRFNILNFWPKVTRVLLRERWEEMLRFRQELEDVMVPLIRARKQKQGKDEGVVSYVDTLLNLQLPEEKRKLNEEEIVTLCSEFMDGGTDTTSTALQWIMANLVKYPQVQERLVSEIREVMSGREDREVKEEELQKFPYLKAVILEGLRRHPPGHFVLPHAVSEDVVLNDYLIPKNGTVNFMVAEMGWDPKVWEDPMTFKPERFMNDEVFDITGSKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVWNFEWKVPEGGDVDLSEKQEFTHEEDEPSCVRKHSWWLVEASSGAILVGENHGPGALHDDNKDCRVDIETLDLDDSWLMREIVTLMVVAMEVACDGCHGSLLAWLHDGMMSLNDLCGGDGGFGGLNVEEDGDVAVAKCHLNTVVHTWIGLIQLGLEDASLFVFVMQWVAEARHCFATAVITVVRHHTTVASSRRWRNTNYAVSTPSYSFSTSSPYPSPLPPPSSCSPTLVAQIHLIGTTMTPSGTLIICKFIYLKCYNYAFYTILYYFLIDFPTITIIIIIIIIIIIIIIIIIIIIIIIVI	797

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu11g02640	797	Gene3D	Cytochrome P450	60	531	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu11g02640	797	PRINTS	P450 superfamily signature	335	352	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu11g02640	797	PRINTS	P450 superfamily signature	469	478	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu11g02640	797	PRINTS	P450 superfamily signature	390	401	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu11g02640	797	PRINTS	P450 superfamily signature	478	489	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu11g02640	797	FunFam	Cytochrome P450 family protein	60	527	-	-
	Vimu11g02640	797	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	49	519	-	-
	Vimu11g02640	797	PRINTS	E-class P450 group I signature	344	370	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu11g02640	797	PRINTS	E-class P450 group I signature	389	407	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu11g02640	797	PRINTS	E-class P450 group I signature	478	501	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu11g02640	Vimu-Chr11	46971679	46976747	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu11g02640	37	518	Cytochrome P450	AT1G64940	55.936	0.0	582

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu11g02640	K24184		-	gmx:100788826	804.283

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