Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02638 ATGGAAGCCTGGTTCATCATCCTAGTGTCTGCGTGCGTATGCGTTATCGTAAGAGCAATATTTTCACTTCAAACAAAAACCATCAACACCCCTCCAGGCCCTCTTCACATCCCAATCGTCACAAGCATCCAATGGCTCCTCAAATCCTTCAGCCAACTCGAGCCGATTCTCCGAAACCTCCACGCCAAGTTCGGTCCCATCGTCACCATCCGCATCGGATCTAGTCGAGCCATATTCATCGCCGACCGCACCCTCGCCCACCAAGCCCTCGTCCAAAAAGGTTCCCTCTTCTCCGACCGCCCCAAGGCTCTCGCCGCCTCCAAAATCCTCACCAGCGACCAACGCAACATCAGCTCCGCCTCCTACGGTCCCACGTGGCGTATCCTCCGCCGAAACCTTACCTCCGAGGTGCTCCACCACTCACGCGTTAAGTCCTTCTCCGAGATCCGCAACTGGGTCCTCCAAGCCCTCCTCGCTCGCCTTAAATCTGATTCTCAATCCAACGATTCCATCAGAGTTATCGATCATTTCCGGTACTCCATGTTCTGCTTGCTCGTCTTCATGTGCTTCGGGGAGCGACTCGATGAGGGCAAAGTCAGAGACATCGAGCGCGTCCAACGGCAGTTACTTCTAGGGTTTACAAGGTTTAACATCCTTAATTTCTGGCCCAAAGTCACCCGCGTTTTGCTCCGCGAACGTTGGGAGGAGATGCTTAGGTTTCGCCAAGAGCTAGAGGACGTGATGGTTCCACTTATAAGAGCCAGGAAGCAAAAGCAAGGCAAGGATGAAGGTTTGCCCGAGGAGAAACGCAAGCTCAACGAAGAGGAGATTGTGACGCTGTGTAGTGAGTTTATGGACGGGGGCACAGACACGACTTCTACGGCGCTGCAATGGATCATGGCGAATTTGGTGAAGTACCCGCAGGTGCAAGAGAGGTTGGTGAGTGAGATAAGGGAGGTAATGAGTGGGAGAGAAGACAGAGAAGTGAAAGAAGAAGAGTTGCAAAAATTTCCTTATCTGAAGGCTGTGATTTTGGAGGGTTTGAGGCGTCACCCACCTGGCCATTTTGTGTTGCCACATGCAGTGAGTGAGGACGTGGTTTTGAATGATTACTTGATCCCTAAGAATGGGACAGTGAATTTCATGGTGGCAGAGATGGGGTGGGACCCAAAGGTATGGCATTACAAGATTTATAATCGATTACAGAACTCATTTTCACAGCTAGTACATTTCACTGAAGGTTTTCATCATGCGTGGTCTCTCTCACCATTATGGGGGACCCAAAACATAAGTTTGAACTAA 1302 0.5077 MEAWFIILVSACVCVIVRAIFSLQTKTINTPPGPLHIPIVTSIQWLLKSFSQLEPILRNLHAKFGPIVTIRIGSSRAIFIADRTLAHQALVQKGSLFSDRPKALAASKILTSDQRNISSASYGPTWRILRRNLTSEVLHHSRVKSFSEIRNWVLQALLARLKSDSQSNDSIRVIDHFRYSMFCLLVFMCFGERLDEGKVRDIERVQRQLLLGFTRFNILNFWPKVTRVLLRERWEEMLRFRQELEDVMVPLIRARKQKQGKDEGLPEEKRKLNEEEIVTLCSEFMDGGTDTTSTALQWIMANLVKYPQVQERLVSEIREVMSGREDREVKEEELQKFPYLKAVILEGLRRHPPGHFVLPHAVSEDVVLNDYLIPKNGTVNFMVAEMGWDPKVWHYKIYNRLQNSFSQLVHFTEGFHHAWSLSPLWGTQNISLN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02638 433 CDD CYP77_89 63 393 - -
Vimu11g02638 433 Gene3D Cytochrome P450 24 396 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02638 433 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02638 433 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02638 433 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02638 433 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02638 433 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02638 433 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02638 433 Pfam Cytochrome P450 31 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02638 433 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 394 - -
Vimu11g02638 433 SUPERFAMILY Cytochrome P450 31 394 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02638 Vimu-Chr11 46852628 46853965 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02638 1 393 Cytochrome P450 AT1G64940 51.905 8.71e-156 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02638 K24184 - gmx:100788826 624.394