Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02615 ATGGAACGTAACAATAGCAGCACGCAGACGGATTTCGTGGAAGTAACATTAGAGGAAGGAACATCGGGTTTCATCAAAGTACACAAAGTTGTTCCACCACCCTACAAGAGCAGCTTTCAGAAGTTCTTCGCCAAGCTCAAGGAAATCCTTTTCCCTGATGATCCTTTTCGCCAATTTAAGGGAGAACCTCTTCAGAGAAAACTAATCCTTGGAGCTCAATATTTATTCCCTGTGCTTCAATGGGCTCCTACTTACAACCTCAAACTCTTCAAATCTGACCTTATTTCTGGCCTCACAATTGCAAGTCTGGCCATCCCTCAGGGAATCAGCTATGCTAAGCTTGCAAATGTTCCTCCAATTCTGGGACTCTATTCTAGTTTTGTTCCTCCCCTTGTGTATGTTGTTCTTGGAAGCTCAATGGATCTTGCAGTAGGACCCGTTTCAATTGCTTCCCTAGTGCTAGGATCCATGATCAGTGAAGAAGTTTCTCCCACTGCACAACCTGACCTCTTTCTTCAAGTAGCCTTGACTTCAACATTCTTTGCTGGGATCTTTCAATCAGCCCTTGGAATTCTAAGGCTTGGATTTATCATTGATTTTCTATCGAAGGCAATCCTTATTGGATTCATGGGTGGATCAGCTGTAATTGTAGGTCTGCAACAGCTGAAGGGTCTTCTCGGAATCACACATTTCACCAGCAAGATGGCCCTGGTTCCTGTTATGAGTTCCGTCTTTAATAACATTGACGAGTGGTCCTGGCAAACAATAGTGATGGCCATTTGCTTCTTGCTCTTTCTCCTGGGTGCAAGACACGTGAGCATAAAGAAACCAGAGTTATTCTGGGTCTCAGCTGGTGCTCCTCTTGTGTCTGTCATAATTTCTACTGCCGTGTCTTTTGCAATAAAGGCTCAACGTCATGGCATCAGTGTGATTGGAAAATTGCCAGAAGGAGTAAATCCTCCTTCAGCAGATAAGCTACTCTTTCGAGGAGATCATCTGGCTCTGGCCATCAAAACTGGCCTTATTACTGGAATTTTATCCCTCACAGAAGGAATTGCAGTGGGAAGAACATTTGCTACCATGAGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATAGGATTCATGAATGTGGTTGGCTCCACAACATCCTGCTATGTTACAACAGGATCTTTCTCTCGCTCAGCTATCAATCACAACGCAGGTGCTAGAACAGCAATGTCCAACGTAGTAATGTCTGTGACAGTCTTAGTGACACTGTTGTTTCTGATGCCTTTGTTCCAATACACACCAAATGTTATATTGGGTGCAATCATAATATCAGCTGTAATTGGCCTCATTGATATTCCTTCTGCTTGTCTCATTTGGAAGATAGACAAATTCGATTTCGTTGTGATGTTGGCAGCATTCTTTGGTGTCATTTTTATCTCTGTCCAAGTCGGCCTAGCTGTTTCAGTCGCATTATCAGTTTTAAGGATACTCCTGCAAATTACAAGGCCTAAAATAGTAATGTTGGGGAACATACCTGCGACAAACATATATAGGAATCTTCATCATTATAAGGAAGCCATAAGAGTACCTGGTTTTCTTATTTTAAGAATAAAGGCTCCCATCAACTTTGCAAACATCACATATCTCAACGAGAGAATATATCGGTGGGTAGAAGAAGAACAAGCTACGATAAAAGAAAACGTCTGCCTTCAATTTCTCATTCTTGACATGTCAGCTGTGAGTACCATAGACACAAGTGGAGTCTCACTTTTCAAGGACTTGAAAAACGCATTGACAATGAAGGGTGTTTCGATTGTGTTGGTGAATCCTCTGGCTGAGGTCATAGATAAGCTGCAAAAATCAGATGATGCTAATGATTTCATTCGAGCAGAATACCTTTTCTTAACAGTTGGAGAGGCTGTAGCTTCACTTTCATCAACAATGAAGAGTCAAACACCAACCGTGCAAGACGCGAGGTGGGATATACCATTGTGA 1992 0.4217 MERNNSSTQTDFVEVTLEEGTSGFIKVHKVVPPPYKSSFQKFFAKLKEILFPDDPFRQFKGEPLQRKLILGAQYLFPVLQWAPTYNLKLFKSDLISGLTIASLAIPQGISYAKLANVPPILGLYSSFVPPLVYVVLGSSMDLAVGPVSIASLVLGSMISEEVSPTAQPDLFLQVALTSTFFAGIFQSALGILRLGFIIDFLSKAILIGFMGGSAVIVGLQQLKGLLGITHFTSKMALVPVMSSVFNNIDEWSWQTIVMAICFLLFLLGARHVSIKKPELFWVSAGAPLVSVIISTAVSFAIKAQRHGISVIGKLPEGVNPPSADKLLFRGDHLALAIKTGLITGILSLTEGIAVGRTFATMRNYKVDGNKEMMAIGFMNVVGSTTSCYVTTGSFSRSAINHNAGARTAMSNVVMSVTVLVTLLFLMPLFQYTPNVILGAIIISAVIGLIDIPSACLIWKIDKFDFVVMLAAFFGVIFISVQVGLAVSVALSVLRILLQITRPKIVMLGNIPATNIYRNLHHYKEAIRVPGFLILRIKAPINFANITYLNERIYRWVEEEQATIKENVCLQFLILDMSAVSTIDTSGVSLFKDLKNALTMKGVSIVLVNPLAEVIDKLQKSDDANDFIRAEYLFLTVGEAVASLSSTMKSQTPTVQDARWDIPL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02615 663 FunFam Sulfate transporter 31 501 646 - -
Vimu11g02615 663 Pfam STAS domain 522 639 IPR002645 -
Vimu11g02615 663 NCBIfam sulfate permease 77 639 IPR001902 GO:0016020|GO:0055085
Vimu11g02615 663 SUPERFAMILY SpoIIaa-like 527 643 IPR036513 -
Vimu11g02615 663 Pfam Sulfate permease family 90 470 IPR011547 GO:0016020
Vimu11g02615 663 CDD STAS_SulP_like_sulfate_transporter 522 636 - -
Vimu11g02615 663 Gene3D STAS domain 501 646 IPR036513 -
Vimu11g02615 663 PANTHER SULFATE TRANSPORTER 37 646 IPR001902 GO:0016020|GO:0055085
Vimu11g02615 663 ProSiteProfiles STAS domain profile. 521 643 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02615 Vimu-Chr11 46399549 46404808 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02615 18 650 Inorganic Solute Cotransporters AT3G15990 63.108 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02615 K17471 - gmx:100779433 1014.22