Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02612 ATGCAAGAAATAAGGGAAATCGTCCAAGAAATAAAAGACATGCTGCAAGAACTCATCAATGGTGGAAGGGGCTCAGAAAGAAGTGAAAAATTTGTCATGAAAGGAAAGAAAGAGGAAAAAACGGGTAGGAATACTGTGAAAGACAGTCTGCACAACATCAAGAAAGGCAAGAAATTCTCTGAAGAAGAGTACTTGGCTAATGATGAAGAGAAGAAGGAAGATATCCACGGAGTAGTAAAACTAGATAAGGAAGGAGAAGAATTGTTGAGGCATGGGGTTAAAACAGTGGTTTCAAGAAGCAACCGAGTTGAGGTCCGAGTGTCCACGGGTGCATCCACTATAGCAGTTACAGATCCATATCCTGAAATTCCTGATGTTATAATACTTGCAGATCTAGCTTCTAGCAATTGCCACAAAGGAATTTCCAATTTTCATGCAGATTCTTTATTAACTAGCCATCTTGAATTACTCATAGTGGAGGAAGGTAAAGATGGCAGGAAAGAAACTTCAGGAATGGAAGCTGGGCAAACAGTTTTAGAACGAACTGTGATACTTGTGCTTTACGGGGATAAACCAAATGTTACCTACCTTAAGGATTCTCTCAATGTTGTCCAAAATGCTACACAAGCTGCTCAACATGATGATGATGATGATGAATTTGCATGGTCAGATCAACAAGCTCTTTCCTTTTTAGCTTCTAGGATGAACAAATCTAGACAAGGAGAGGGTTTGGCCAGTGCAGCTGCTATACAAATACAGAAAAACTCTCAAGGTTGGAAGAAGAGAAAAGAATTATTGATCATTCGTCAAAGAATTATTAAAGTCCAAGTCCATGTAAGAGGTCACTGGGTCAGAATGCAGGTAGTAGTTAGTTGGTTCCCTTCCTATGATAACAAATTGATGAAGATGAACCATGGGTACAAGCTTCACTATCCCAACCTTGAGGACAAGGTTGTTCTGCAACAGCATGCAATGATGGGATATAATGTGTATGACAGAAGGAAACAGATTAAGAAGTAG 1020 0.3951 MQEIREIVQEIKDMLQELINGGRGSERSEKFVMKGKKEEKTGRNTVKDSLHNIKKGKKFSEEEYLANDEEKKEDIHGVVKLDKEGEELLRHGVKTVVSRSNRVEVRVSTGASTIAVTDPYPEIPDVIILADLASSNCHKGISNFHADSLLTSHLELLIVEEGKDGRKETSGMEAGQTVLERTVILVLYGDKPNVTYLKDSLNVVQNATQAAQHDDDDDEFAWSDQQALSFLASRMNKSRQGEGLASAAAIQIQKNSQGWKKRKELLIIRQRIIKVQVHVRGHWVRMQVVVSWFPSYDNKLMKMNHGYKLHYPNLEDKVVLQQHAMMGYNVYDRRKQIKK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02612 339 Coils Coil 1 21 - -
Vimu11g02612 339 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 99 288 - -
Vimu11g02612 339 Gene3D - 245 290 - -
Vimu11g02612 339 MobiDBLite consensus disorder prediction 24 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02612 Vimu-Chr11 46359599 46360798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02612 99 292 CAMTA Transcription Factor Family AT5G09410 48.113 1.96e-46 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02612 K21596 - gmx:100795682 198.749