Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02595 ATGCTTACAAATGAGAACAAAGAACATGAAAATTCTCCAAAACAGGACTCCTGGTGCGGGACCGATTTCTCCCAATCTAGACCTCCGATTACTGATCCGAACGGTCAGAATGAAGAACCATATGTCTGGAACCTATTGTCCAAAACGCAGCTCGATCCAATGGTGAACGACTTCACAATGACGAAAACACCAATGCAGATTGGAAAATTAGGAGGGGTTGTTGTTGGTATGGCAGTTACAGTAGACGTCTTCATTGCTGGGCCTGTGTCAGGAGCCTCTATGAACCCAGCTAGAAGCCTTGGACCTGCTTTGGTGATGAACGTTTACACTGGATTTTGGGTTTATATAGTTGGACCATTTGTTGAAGGACATCTACCAAGACCATACAACATCAACATTTTCATCGCTTCTTCTCTATTTGCTTCCACTACTATCATTGTTCATATGGAGTCCACCCTTTGA 462 0.4351 MLTNENKEHENSPKQDSWCGTDFSQSRPPITDPNGQNEEPYVWNLLSKTQLDPMVNDFTMTKTPMQIGKLGGVVVGMAVTVDVFIAGPVSGASMNPARSLGPALVMNVYTGFWVYIVGPFVEGHLPRPYNINIFIASSLFASTTIIVHMESTL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02595 153 PANTHER AQUAPORIN NIP2-1 61 121 IPR034294 -
Vimu11g02595 153 MobiDBLite consensus disorder prediction 1 15 - -
Vimu11g02595 153 Gene3D Glycerol uptake facilitator protein. 54 125 IPR023271 -
Vimu11g02595 153 MobiDBLite consensus disorder prediction 16 39 - -
Vimu11g02595 153 SUPERFAMILY Aquaporin-like 68 121 IPR023271 -
Vimu11g02595 153 PRINTS Major intrinsic protein family signature 76 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu11g02595 153 PRINTS Major intrinsic protein family signature 113 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu11g02595 153 MobiDBLite consensus disorder prediction 1 39 - -
Vimu11g02595 153 Pfam Major intrinsic protein 51 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02595 Vimu-Chr11 46139491 46142945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02595 68 121 Major Intrinsic Protein MIP AT5G37820 70.370 1.37e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02595 K09874 - gmx:100819179 91.2781