Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02577 ATGCCATTCTCTTCCACTTCCATCATTGTTTTCTTCTTTCCTTTCTTTCTCTTCTTTCATTTGAACAAATCTATCATATTTATTAGTATTTTCTTCCTTTGGGACACAAAATTAATGGGTTGCAGGGACATGAGAAAGGTGAAGTGGGGGAAGAGGAGGAGGAGGCAAGAGGGTGTGGAGAGGAGGATGAAGAAGCTGCAGCGCCTGGTTCCCGGTGGCGCCGGAATGAACCCCGACCGGCTCTTCCTTAAGACGGCGGAACACATCTTAAAATTAAGGATCCAACTCAATGTGCTGCAAGCTCTTTCCAAGGTTTTCAATGCTTGA 327 0.4526 MPFSSTSIIVFFFPFFLFFHLNKSIIFISIFFLWDTKLMGCRDMRKVKWGKRRRRQEGVERRMKKLQRLVPGGAGMNPDRLFLKTAEHILKLRIQLNVLQALSKVFNA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02577 108 CDD bHLH_AtIBH1_like 51 102 IPR044549 GO:0006355
Vimu11g02577 108 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 51 106 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02577 48 102 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43060 42.623 1.65e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02577 - - pvu:PHAVU_003G053700g 128.642