Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02514 ATGTCGCCGGAAAGAGACGTCATATCGGCCACGCCGGGAGCGTTCCGGCTGCGGTGGGACGTGTTCCTGAGCTTCAGAGGCACCGACACGCGCGGCACTATCACGAAAGGTCTGTACAAGAGTCTGCAGGCGCGTGGGGTTCGCGTGTTCCTGGACGACGAGGGGTTGGAGCGTGGGGAAGCGGTAGCGAATGGGCTGATGGAGGGAATTGATGACTCTGCAGCATTCATTGTCATCATATCTGAAAACTACGCTTCTTCACACTGGTGTCTTGAGGAACTCACCAAGATTTGCGACACCGGTAGACTCCTCTTGCCCGTTTTCTACCGGGTTGACCCGTCGCAGGTTCGACACGTATCGGGTTCCTTCGGATCGGGTTTCGAATCGCATGAAAAAAGGTTTGAGAAAAATACGGTTTCAAGATGGAAGGAAGCGTTGAAGAAAGTTGGTGGAGTTGCTGGTTGGGTTTTTAATCACAGTGAGGAAGATGATCTGATTCAGCGTTTAGTGCGAAGGGTGTTGAAAGAGTTGAGTAACACTCCTATGGGTGTGCCTGAGTTTGCAGTGGGGCTTGATGAACGTGTTGAGAGGGTGATGGAGGTTTTGCAAGTTCAATCCAATGGTGTGAAGGTTTTGGGGTTGTATGGGATGGGTGGGGTTGGTAAGACAACCCTGGCCAAGGCCCTTTTCAATGCCCTTGTTAACCGTTTTGAGCACCGTTGCTTCATTTCCGACGTTAGACAAGTTTCATCAAAACACGATGGTTTGGTTTCCCTTCAAAGCAAAATCATTAAAGACCTTTTTTCTGGAGCAGGGTCTGCCTCCATCGGTGATGTCAATGATGGTATTTCTGCTATCAAAGGGAGACTTAGTGAGAATCGAGTTTTACTAGTCTTGGATGATGTTGATGAAGTGAAGCAGCTTGATGCTTTGATTGGTAAGAGGGAATGGTTTTACGATGGAAGCTGTGTGATAATCACAACACGGGATACAAAAGTTCTAACTCAGAATCATATAACTGTGTCGTATGAAGTTAGAGAGTTGTATGCTTCTGAAGCTCGAGTGTTATTCAGTTATCATGCACTGAGAAGAAGTGCACCACCAGAAAATCTTCTGAGTCTATCAGAGGAGATAATATCCCTGACGGGAAGAATGCCTTTGGCTCTGGAAGTGTTTGGTTCGTTTTTGTTTGGTAAGAGGAGGGAGGAGGAATGGGAGGATGCTGTGAAGAAGCTAAGGCTAATTCGCCCTCACCATCTTCAGGATGTGTTGAAGATAAGTTACGATGCTTTAGATGAAGAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTGTTTGTACAAATGGACATGAAGCGTGATGGTGTGATTGATGTGTTAAGAGGTTGTGGTTTTAGGGGTGAGATTGCTATCACGGTACTGGTGCAGAAGTGCTTGATGAAAATCACTCCGGATAATACTGTGTGGATGCATGATCAAATTAGAGACATGGGAAGGCAAATAGTCATGGATGAAAGCTTTGTGGATCCTGGTTCGCGTAGTAGACTATGGGATCGAGCTCAAATCATGACTGTGTTGAAGGGTCACAAGGGAACTAGATGCGTTCAAGGGATTGTACTTGATTTTGAGGAAGAAAGGTTTTATAAGGGAAAGGTCGGATCAGTTTTTCCGAAGAAGTTTCAATGGAGACCAAGTTTAAGAAATATATCATGTTACATCAAACAATGCCTTAATAAGAATCATCCTGAACCTCAAGCAGAGGAAAACACAGAGTTTGTACTTCACACGAAATCCTTTGAACCAATGGTTAATCTGAGACAGCTTCAGATCAACAATCTGAAATTACAGGGCAAGTTTCTTCCATCTGAACTGAAGTGGCTACAATGGCAAGGGTGCCCTTTAGAACGCATGCCTTTGAAATCTTGGCCAGGAGAACTGGCTGTCCTTGATCTCCAAAACAGCAAGAAAATGGAAACCTTGTGGGGATGGAATGGTTACAACAAGGTGCCACAGAAGTTAATGGTCTTGAACCTCTCCAACTGCATCCAACTCACTGCTATACCTGATTTATCTGGGTGTCAATGTCTGGAGAAGATTGATTTGGAGAACTGCATTAATCTAACTAAGATTCATGAATCAATTGGCAGTTTGAGTACCTTGCGTAGTTTAAATTTAACGCGTTGTTCAAGCCTTATCAACCTTCCCATTGATGTCTCGGGGCTAAAACAACTGGAGAGTCTTTTTCTTTCTGGCTGCTCCAAGTTAAAATCATTGCCAGAAAACATTGGAATCTTGAAATCCTTGAAAGCACTTCATGCTAATGACACTGCTATAGCAGAGTTGCCCCTGTCCATTTTTCGCCTCACGAAGCTTGAGCAGCTTGTTTTAGAACGTTGCCAATATTTGAGAAGGCTACCTAATTCTCTAGGACACCTATGTTCTTTGCAAGAATTATCTCTATATCACTCTGGGTTGGAAGAATTACCTGAGTCTGTGGGATCGTTAAATAACCTGGAGACACTCAATTTGATGGGGTGTGAATCTCTCACTGTTATTCCTGATTCTGTAGGGAATCTCATGTCATTGACAGAACTTCTGGTTGATAGAACTGCAATTAAGGAACTCCCTACAACTGTTGGTTCTTTATCTTACCTGAGGGAATTATCAGTTGGAAACTGTAAACTTCTCACCCAATTGCCGAATTCAGTTAAAACGTTGGCCTCAGTTGTGGAACTTCAGTTAGATGGAACAGCCATCACAAATTTGCCAGATGAGATTGGAGAGATGAAGCTACTGAGGATACTTAAGTTGATGAATTGTAAAAATCTTGAATACTTACCAGAATCTATTGGCCACCTAGCATCTCTTACTACATTGAACACGGTCAATGGAAATATCAAAGAATTGCCAGAATCCACTGGACGGCTGGAAAATCTTGTCAACTTAAGATTGAACAAATGCAGAATGCTCAGAAAGCTTCCAGCTTCTATAGGAGATTTGAAATCTCTATATCACATTTTCATGGAGGAAACATCTGTGTCAAGCTTACCTGAAAGCTTTGGGATGCTGTCAAGCTTGAGAACATTGAAAATGGCAAAGAGGCCTGAATTAGATACCAATGAAAGTAGCTTCCTTGCAGAACCTAAAGAGAACCATAGCCCTTTTGTACTAACATCTTCCTTCTGCAATCTGACCTTGCTAACTGAGCTTGATGCCCGTGCATGGAAAATATCTGGGAAAATTCCTGATGAATTTGAGAAGTTGTCACTATTGGAAACTTTGAAATTAGACAGGAATGATTTTCACAGCCTGCCTTCCAGTTTGAAGGGCCTTTCTATCCTTAAGGTCCTTTCACTGTCAAACTGCACTCAGCTGAACTCTCTCCCCTCACTTCCTTCAAACCTGATTAAGCTGAATGTTCAAAACTGTTCTTCATTAGAAACTATCCATGACATGTCAAATTTAGAGAGCCTGCAGGAGTTGAATCTCACAAACTGTGTAAAAGTGGGGGATATTCCGGGTCTTGAAAGCTTGAAGTCCTTGAGAAGGTTGTACCTGAGTGGTTGCATTGCATGCTCCTCACAAATACGAAAGAGACTTTCGAAGGTTGCACTGAGGAATTTACAGAACTTAAGCATGCCTGGAAGCAAATTACCTGAATGGTTTTCTGGGCAAACTGTGAGCTTTTCCAAGCGTAAAAATCTTGAGCTAAAGAGTGTACTTGTTGGTGTTATTATTTCAATCAACCATAGCATTGACATACCCAACATGAAGAGAGATGATATGCCAGGCTTGATTGATGTTGAAGCAAATGTTCTCAAAGGGGGCCGAACTCTTTTTAGGACTGTGTTAAACATCTGTGGGATGCCTAGAACAGATGAAGAACACATGCACTTGTGTAGGTTCCATGATTACCATCAGCTGGTAGCCTTTCTAAAAGATGCTGATACCTTTTCTGTGAGCAAGAGAAATCCACCTTTTGATACGGGGTTGGAGTTAAGAAAATGTGGGGTCTATTTAATCTTTGAAGGAGATGATGATTATGATGGAGGGGAAGAATCATTGGACAAAGGCCTACAATCTGTCTCAGAAAAATTGGCCAATTTTTTCAGCACTCCTGAAGGTGGTGCTCAGGTGAGTGTCAATGGAATTGGACATGCTGGAACATGA 4170 0.429 MSPERDVISATPGAFRLRWDVFLSFRGTDTRGTITKGLYKSLQARGVRVFLDDEGLERGEAVANGLMEGIDDSAAFIVIISENYASSHWCLEELTKICDTGRLLLPVFYRVDPSQVRHVSGSFGSGFESHEKRFEKNTVSRWKEALKKVGGVAGWVFNHSEEDDLIQRLVRRVLKELSNTPMGVPEFAVGLDERVERVMEVLQVQSNGVKVLGLYGMGGVGKTTLAKALFNALVNRFEHRCFISDVRQVSSKHDGLVSLQSKIIKDLFSGAGSASIGDVNDGISAIKGRLSENRVLLVLDDVDEVKQLDALIGKREWFYDGSCVIITTRDTKVLTQNHITVSYEVRELYASEARVLFSYHALRRSAPPENLLSLSEEIISLTGRMPLALEVFGSFLFGKRREEEWEDAVKKLRLIRPHHLQDVLKISYDALDEEEKCIFLDIACLFVQMDMKRDGVIDVLRGCGFRGEIAITVLVQKCLMKITPDNTVWMHDQIRDMGRQIVMDESFVDPGSRSRLWDRAQIMTVLKGHKGTRCVQGIVLDFEEERFYKGKVGSVFPKKFQWRPSLRNISCYIKQCLNKNHPEPQAEENTEFVLHTKSFEPMVNLRQLQINNLKLQGKFLPSELKWLQWQGCPLERMPLKSWPGELAVLDLQNSKKMETLWGWNGYNKVPQKLMVLNLSNCIQLTAIPDLSGCQCLEKIDLENCINLTKIHESIGSLSTLRSLNLTRCSSLINLPIDVSGLKQLESLFLSGCSKLKSLPENIGILKSLKALHANDTAIAELPLSIFRLTKLEQLVLERCQYLRRLPNSLGHLCSLQELSLYHSGLEELPESVGSLNNLETLNLMGCESLTVIPDSVGNLMSLTELLVDRTAIKELPTTVGSLSYLRELSVGNCKLLTQLPNSVKTLASVVELQLDGTAITNLPDEIGEMKLLRILKLMNCKNLEYLPESIGHLASLTTLNTVNGNIKELPESTGRLENLVNLRLNKCRMLRKLPASIGDLKSLYHIFMEETSVSSLPESFGMLSSLRTLKMAKRPELDTNESSFLAEPKENHSPFVLTSSFCNLTLLTELDARAWKISGKIPDEFEKLSLLETLKLDRNDFHSLPSSLKGLSILKVLSLSNCTQLNSLPSLPSNLIKLNVQNCSSLETIHDMSNLESLQELNLTNCVKVGDIPGLESLKSLRRLYLSGCIACSSQIRKRLSKVALRNLQNLSMPGSKLPEWFSGQTVSFSKRKNLELKSVLVGVIISINHSIDIPNMKRDDMPGLIDVEANVLKGGRTLFRTVLNICGMPRTDEEHMHLCRFHDYHQLVAFLKDADTFSVSKRNPPFDTGLELRKCGVYLIFEGDDDYDGGEESLDKGLQSVSEKLANFFSTPEGGAQVSVNGIGHAGT 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02514 1389 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 808 IPR044974 GO:0006952
Vimu11g02514 1389 SUPERFAMILY L domain-like 489 916 - -
Vimu11g02514 1389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 442 IPR027417 -
Vimu11g02514 1389 Pfam TIR domain 19 181 IPR000157 GO:0007165
Vimu11g02514 1389 PRINTS Disease resistance protein signature 715 731 - -
Vimu11g02514 1389 PRINTS Disease resistance protein signature 382 396 - -
Vimu11g02514 1389 PRINTS Disease resistance protein signature 289 303 - -
Vimu11g02514 1389 PRINTS Disease resistance protein signature 211 226 - -
Vimu11g02514 1389 Pfam NB-ARC domain 193 414 IPR002182 GO:0043531
Vimu11g02514 1389 Gene3D - 174 343 IPR027417 -
Vimu11g02514 1389 SMART LRR_typ_2 906 929 IPR003591 -
Vimu11g02514 1389 SMART LRR_typ_2 859 882 IPR003591 -
Vimu11g02514 1389 SMART LRR_typ_2 741 763 IPR003591 -
Vimu11g02514 1389 SMART LRR_typ_2 1111 1138 IPR003591 -
Vimu11g02514 1389 SMART LRR_typ_2 812 835 IPR003591 -
Vimu11g02514 1389 SMART LRR_typ_2 953 976 IPR003591 -
Vimu11g02514 1389 SMART LRR_typ_2 765 788 IPR003591 -
Vimu11g02514 1389 SMART LRR_typ_2 1088 1110 IPR003591 -
Vimu11g02514 1389 ProSiteProfiles TIR domain profile. 17 177 IPR000157 GO:0007165
Vimu11g02514 1389 Gene3D - 16 173 IPR035897 -
Vimu11g02514 1389 Gene3D Ribonuclease Inhibitor 588 772 IPR032675 -
Vimu11g02514 1389 Gene3D Ribonuclease Inhibitor 962 1176 IPR032675 -
Vimu11g02514 1389 Gene3D Ribonuclease Inhibitor 773 870 IPR032675 -
Vimu11g02514 1389 Gene3D Ribonuclease Inhibitor 871 961 IPR032675 -
Vimu11g02514 1389 SMART till_3 18 152 IPR000157 GO:0007165
Vimu11g02514 1389 SUPERFAMILY L domain-like 896 1223 - -
Vimu11g02514 1389 SMART LRR_CC_2 882 909 IPR006553 -
Vimu11g02514 1389 SMART LRR_CC_2 693 720 IPR006553 -
Vimu11g02514 1389 SMART LRR_CC_2 929 956 IPR006553 -
Vimu11g02514 1389 SMART LRR_CC_2 1155 1184 IPR006553 -
Vimu11g02514 1389 SMART LRR_CC_2 835 862 IPR006553 -
Vimu11g02514 1389 Gene3D - 348 432 IPR042197 -
Vimu11g02514 1389 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 155 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02514 Vimu-Chr11 44292143 44299336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02514 789 959 WRKY Transcription Factor Family AT4G12020 35.838 2.69e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02514 - - gmx:100786934 2126.29