Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02511 ATGTCCATAAACAACAATGGTATAGACGTTTTGCAAGATCAAAAGTGGCAGTCTATATCCTGGAAGAAGTTGCAGGTTGGAGACATTGTGAAGGTTAAACAGGATGGATTCTTTCCTGCAGATCTGCTTTTCTTGGCAAGCACTAATGCAGATGGTGTCTGCTACATTGAGACTGCTAACTTGGATGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTATGTGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCATTGTATACCTTTACTGGAAATCTTATAACCCAAAAGCAAACATTGCCTCTCAGTCCAAATCAAATTTTGTTGCGGGGTTGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATATTTACTGGACATGAAACAAAGGTGATGATGAATACAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGAAAGCTTGACAAGCTCATACTAACTTTATTTGCAACTCTCTTCATGATGTGTTTCATTGGAGCCATAGGCAGTGCTATCTTCGTAAATAAAAAATATTTTTACTTACATCTTGATTCATCAGAAGAGGGCTCGGCACAGTTCAACCCCAGAAATAGATTTTTGGTTTTTATTCTGACTATGTTTACCCTAATCACACTATACTCAACAATCATTCCCATTTCACTTTATGTGTCCATAGAGATGATAAAATTTATTCAATCAACTCAATTTATCAACAAAGACTTGTCCATGTACCATGCTGAAACAAATACACCTGCATTAGCCAGAACTTCAAATTTGAATGAAGAACTTGGGCAGGTGGAATACATTTTCTCTGATAAAACTGGAACTCTAACAAGAAATTTAATGGAGTTCTTCAAGTGTTCGATTGGAGGAGAGGTCTATGGAAATGGTGTGACTGAAATTGAGAGAGGATTAGCAGAGCGCAATGGAATGAAGATTGAGGAAAATATTTCTTCCAAAGCAGTGCAAGAGAGAGGTTTTAATTTTGATGATGATAGGCTTCTGAGAGGAGCTTGGAGGAATGAGCCTAATCCTGATGTTTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTGCTGCCAGAGGGTGATGAATCCCCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTATTGCTGCAAAAAACTTTGGTTTCTTTTTCTACAGGTTTGATGTTCAAACTTCTTGA 1266 0.3799 MSINNNGIDVLQDQKWQSISWKKLQVGDIVKVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYVTPEKASEFKGEIQCEQPNNSLYTFTGNLITQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILTLFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPRNRFLVFILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLSMYHAETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGLAERNGMKIEENISSKAVQERGFNFDDDRLLRGAWRNEPNPDVCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKNFGFFFYRFDVQTS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02511 421 Gene3D - 1 153 - -
Vimu11g02511 421 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 417 - -
Vimu11g02511 421 NCBIfam phospholipid-translocating P-type ATPase 2 415 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vimu11g02511 421 Gene3D - 298 420 IPR023299 GO:0000166
Vimu11g02511 421 SUPERFAMILY Calcium ATPase, transmembrane domain M 72 282 IPR023298 -
Vimu11g02511 421 FunFam Phospholipid-transporting ATPase 1 153 - -
Vimu11g02511 421 SUPERFAMILY Calcium ATPase, transduction domain A 8 149 IPR008250 -
Vimu11g02511 421 FunFam Phospholipid-transporting ATPase IC 285 297 - -
Vimu11g02511 421 ProSitePatterns E1-E2 ATPases phosphorylation site. 290 296 IPR018303 -
Vimu11g02511 421 Pfam E1-E2 ATPase 8 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02511 Vimu-Chr11 44217804 44239214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02511 1 415 Primary Pumps ATPases AT1G59820 77.163 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02511 K14802 - gmx:100815547 800.045