Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02501 ATGAATAACGAGGTGAAGTTGTTGGGAGCATGGCCAAGCCCATACGTCTTGAGGGTTCGGATAGCTCTAAACATGAAATCAGTGAAGTATGACTTCCATGAGGAAAAGTTATCGTCCAAAAGCCAGCTTCTTCTTCAATCCAACCCCATTTACAAGAAAATCCCAGTTCTCATTCATAAGGAGAAACCCCTCTGCGAGTCTTTGATCATTGTGCAATATGTGGATGATGTTTGGTTCTCTGCCTCTCCCATTCTCCCTTCTGATCCTTATGACCGTGCCATTGCTCGTTTCTGGACCGTCTACATTGATCAAACGTTGTATCCAACCATGAGATCCATTAGAGGAGCTTCGGAAGAGGATGAGAAGAAGAGGTTGATAGAGGAAGTGAGAAAAGGATTGACAATGTTGGAGGGTGTGTTCAAAGATAGCAGCAAAGGCAAGGGCTTTTATGGTGGTGACCAAATTGGGTTGTTGGATATTGCACTTGGAAGCTTCTTGGGGTGGCTGAGGGTGGTAGAGATAATCAACGGGGTGAAGTTGCTTGACCAAAACAACACACCTGAGCTGCTGAAATGGGCTGAAAGGTTTTGTGCACATTCTGCTGTCAAAGATGTTATGCCAGAGACAGGGAGGCTTCTTGAGTTTTCCAAAACTCTAGCTAAGGGCTGA 669 0.4514 MNNEVKLLGAWPSPYVLRVRIALNMKSVKYDFHEEKLSSKSQLLLQSNPIYKKIPVLIHKEKPLCESLIIVQYVDDVWFSASPILPSDPYDRAIARFWTVYIDQTLYPTMRSIRGASEEDEKKRLIEEVRKGLTMLEGVFKDSSKGKGFYGGDQIGLLDIALGSFLGWLRVVEIINGVKLLDQNNTPELLKWAERFCAHSAVKDVMPETGRLLEFSKTLAKG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02501 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 220 IPR010987 -
Vimu11g02501 222 SUPERFAMILY Thioredoxin-like 4 107 IPR036249 -
Vimu11g02501 222 CDD GST_C_Tau 89 219 IPR045074 GO:0004364|GO:0006749
Vimu11g02501 222 Gene3D - 85 222 - -
Vimu11g02501 222 SFLD Glutathione Transferase (cytosolic) 2 220 IPR040079 -
Vimu11g02501 222 SUPERFAMILY GST C-terminal domain-like 84 219 IPR036282 -
Vimu11g02501 222 CDD GST_N_Tau 5 78 - -
Vimu11g02501 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 211 IPR045073 -
Vimu11g02501 222 FunFam Glutathione S-transferase GSTU6 1 85 - -
Vimu11g02501 222 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Vimu11g02501 222 Pfam Glutathione S-transferase, C-terminal domain 98 199 IPR004046 -
Vimu11g02501 222 Pfam Glutathione S-transferase, N-terminal domain 5 75 IPR004045 -
Vimu11g02501 222 Gene3D Glutaredoxin 1 84 - -
Vimu11g02501 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vimu11g02501 222 FunFam Glutathione S-transferase U9 85 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02501 Vimu-Chr11 43997789 44004440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02501 2 219 Glutathione S-transferase Gene Family AT1G10370 57.078 1.02e-89 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02501 K00799 - adu:110272419 311.227