LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu11g02500	ATGGCGAAGAGCGAGTTAAAGGTGATTGGAAAATGGTCGAGTCCTGATGCTATGCGAGTGAAGATTGCCCTGAACATCAAAGCCCTTGAACATGAGCACTTTGAAGAAACGTTGAACCCCAAAAGCGACCTTCTTCAATCAAACCCTGTGTATGGCAAAGTCCCAGTTCTCCTCCACCATGGCAGACCCATCTGTGAATCTTTGATCATAGTTCAATACATAGATGAAACATGGTCCACTGATCCTCCTATCCTCTCCTCCGATCCTCACGATAGAGCTCTTGCTCGCTTCTGGGCTGCTTACATAGATGATAAATGGTTTCCATCCATGAAAAGCATTATGACTGTTGAAGGAGAGGGGGAAAGGAAGCCATACTTTGAGGTGTTGGAAGAAGTACTTGAAAGGATGGAGGGTGCTTTCTGGAAATGCAGCAAAGGAAAGCCATATTTTGCAGGAGACAGGATTGGATTCCTTGACATTGCTTTTGGGTGCTTCCTGGGATGGCTCAGTATGATAGAATATAGATATGAAAGGAAACTGCTGGTTGAAGCAAAGGCTCCTGCTTTGGTGAAATGGGCTGAGAGATTTGCTGCTGACCCTGCTGTCAAGGGGCTTATACCTGAGACTGATAAGCTTGTTGAGATTTCCAAGTCTCTTCAGATCAAATGGAGAGCTGCAATTGGCAAGAACTAG	693	0.4531	MAKSELKVIGKWSSPDAMRVKIALNIKALEHEHFEETLNPKSDLLQSNPVYGKVPVLLHHGRPICESLIIVQYIDETWSTDPPILSSDPHDRALARFWAAYIDDKWFPSMKSIMTVEGEGERKPYFEVLEEVLERMEGAFWKCSKGKPYFAGDRIGFLDIAFGCFLGWLSMIEYRYERKLLVEAKAPALVKWAERFAADPAVKGLIPETDKLVEISKSLQIKWRAAIGKN	230

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu11g02500	230	Gene3D	Glutaredoxin	1	84	-	-
	Vimu11g02500	230	Pfam	Glutathione S-transferase, N-terminal domain	6	76	IPR004045	-
	Vimu11g02500	230	SFLD	Main.3: Omega- and Tau-like	2	224	IPR045073	-
	Vimu11g02500	230	SFLD	Main (cytGST)	2	224	-	-
	Vimu11g02500	230	FunFam	Glutathione S-transferase U9	85	226	-	-
	Vimu11g02500	230	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	88	219	IPR010987	-
	Vimu11g02500	230	Pfam	Glutathione S-transferase, C-terminal domain	97	200	IPR004046	-
	Vimu11g02500	230	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	8	214	IPR045073	-
	Vimu11g02500	230	SUPERFAMILY	Thioredoxin-like	6	107	IPR036249	-
	Vimu11g02500	230	FunFam	Glutathione S-transferase GSTU6	1	85	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu11g02500	Vimu-Chr11	43983603	43984425	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu11g02500	1	219	Glutathione S-transferase Gene Family	AT1G10370	55.204	2.30e-83	246

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu11g02500	K00799		-	cam:101508281	362.073

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