Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02500 ATGGCGAAGAGCGAGTTAAAGGTGATTGGAAAATGGTCGAGTCCTGATGCTATGCGAGTGAAGATTGCCCTGAACATCAAAGCCCTTGAACATGAGCACTTTGAAGAAACGTTGAACCCCAAAAGCGACCTTCTTCAATCAAACCCTGTGTATGGCAAAGTCCCAGTTCTCCTCCACCATGGCAGACCCATCTGTGAATCTTTGATCATAGTTCAATACATAGATGAAACATGGTCCACTGATCCTCCTATCCTCTCCTCCGATCCTCACGATAGAGCTCTTGCTCGCTTCTGGGCTGCTTACATAGATGATAAATGGTTTCCATCCATGAAAAGCATTATGACTGTTGAAGGAGAGGGGGAAAGGAAGCCATACTTTGAGGTGTTGGAAGAAGTACTTGAAAGGATGGAGGGTGCTTTCTGGAAATGCAGCAAAGGAAAGCCATATTTTGCAGGAGACAGGATTGGATTCCTTGACATTGCTTTTGGGTGCTTCCTGGGATGGCTCAGTATGATAGAATATAGATATGAAAGGAAACTGCTGGTTGAAGCAAAGGCTCCTGCTTTGGTGAAATGGGCTGAGAGATTTGCTGCTGACCCTGCTGTCAAGGGGCTTATACCTGAGACTGATAAGCTTGTTGAGATTTCCAAGTCTCTTCAGATCAAATGGAGAGCTGCAATTGGCAAGAACTAG 693 0.4531 MAKSELKVIGKWSSPDAMRVKIALNIKALEHEHFEETLNPKSDLLQSNPVYGKVPVLLHHGRPICESLIIVQYIDETWSTDPPILSSDPHDRALARFWAAYIDDKWFPSMKSIMTVEGEGERKPYFEVLEEVLERMEGAFWKCSKGKPYFAGDRIGFLDIAFGCFLGWLSMIEYRYERKLLVEAKAPALVKWAERFAADPAVKGLIPETDKLVEISKSLQIKWRAAIGKN 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02500 230 Gene3D Glutaredoxin 1 84 - -
Vimu11g02500 230 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Vimu11g02500 230 SFLD Main.3: Omega- and Tau-like 2 224 IPR045073 -
Vimu11g02500 230 SFLD Main (cytGST) 2 224 - -
Vimu11g02500 230 FunFam Glutathione S-transferase U9 85 226 - -
Vimu11g02500 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 219 IPR010987 -
Vimu11g02500 230 Pfam Glutathione S-transferase, C-terminal domain 97 200 IPR004046 -
Vimu11g02500 230 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 214 IPR045073 -
Vimu11g02500 230 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Vimu11g02500 230 FunFam Glutathione S-transferase GSTU6 1 85 - -
Vimu11g02500 230 CDD GST_N_Tau 6 78 - -
Vimu11g02500 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 82 IPR004045 -
Vimu11g02500 230 CDD GST_C_Tau 89 217 IPR045074 GO:0004364|GO:0006749
Vimu11g02500 230 Gene3D - 85 227 - -
Vimu11g02500 230 SUPERFAMILY GST C-terminal domain-like 85 217 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02500 Vimu-Chr11 43983603 43984425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02500 1 219 Glutathione S-transferase Gene Family AT1G10370 55.204 2.30e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02500 K00799 - cam:101508281 362.073