Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02497 ATGAACAAAAAGAAGAAATGTCAAATTGAGGAGCCAAACATCAAAAAGCAAAGAAAAATTATGAAAAGTACATCATGCTCATGTTCATCTTCATCTTCATCTCTACCACCATCACCATCTTTAACTTTACTTGTACCACCACCACCATCTTCACCTCCAATTATACCACCACAACCATCTTCACATTCACCTCTAGCATCACCACCATCCTTACCTCTACCACCACTATCAAGGATGAAAGTGGTAGGGCCAAAACCTAAACCACCACGAAGGGTAGTTGTGACAAGTCCAACACCTCCATCATCAGATTTGTCAGTAGAATTCAGGAATCGAGTCATCGAATTGAATGGCTATAATCTTAAATTTGTGATGCACAAGATACTTTTCTCATCGGATGTGAAGCCAAACAATAACCGATTATCAATTCCAAAAAAGAAAATCAAATGTGATTTTCTCACTGAAGATGAGATTATGAAGTTGGAAGAAAAAGAAAATAATGATAAAATTATTGGTTTGGAAGTGACTGTGTTGGACCCCTATTTGAGAGAATATACTCTGCCAATGAAGAAGTGGACTATGAAATCAGACACCTACAACCTTATAAAGGAGTGGAACAAGATTGTGGTTGCTAACAAGTTTAAAGAAGACCAAGAATTACAAATATGGTCTTTTAGGGTTAATACCAAATTGTATTTATTCTTAAACAAACTTTGA 714 0.3599 MNKKKKCQIEEPNIKKQRKIMKSTSCSCSSSSSSLPPSPSLTLLVPPPPSSPPIIPPQPSSHSPLASPPSLPLPPLSRMKVVGPKPKPPRRVVVTSPTPPSSDLSVEFRNRVIELNGYNLKFVMHKILFSSDVKPNNNRLSIPKKKIKCDFLTEDEIMKLEEKENNDKIIGLEVTVLDPYLREYTLPMKKWTMKSDTYNLIKEWNKIVVANKFKEDQELQIWSFRVNTKLYLFLNKL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02497 237 MobiDBLite consensus disorder prediction 1 101 - -
Vimu11g02497 237 MobiDBLite consensus disorder prediction 19 39 - -
Vimu11g02497 237 SUPERFAMILY DNA-binding pseudobarrel domain 124 232 IPR015300 -
Vimu11g02497 237 Gene3D - 114 236 IPR015300 -
Vimu11g02497 237 Pfam B3 domain-containing protein At2g31720-like 115 208 IPR005508 GO:0003677
Vimu11g02497 237 MobiDBLite consensus disorder prediction 1 18 - -
Vimu11g02497 237 MobiDBLite consensus disorder prediction 40 82 - -
Vimu11g02497 237 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 84 237 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02497 Vimu-Chr11 43938033 43938781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02497 91 230 B3 DNA Binding Superfamily AT1G05930 27.465 5.32e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02497 - - vum:124820374 251.136