Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02435 ATGCCTCGTTTTCCATCTTCTCCATTGTGGCTGTCAGTTCCCCCAAGAAGGTGCAGACGTGATGGATCTGGAGGTGGTTGGGTGATGGATCTGGAGGTGGTTGCGGCGTTCGTGAATTCAGTGGAAGCTCTGGTGGAATGGAACTCCCTCTCCATCGATCGCTACGATGTCCGCCACCTTCTCTCCGCTCCCCTTCCTCCGCGTCTCAAGCGCCGCCCTCCTCAGCCCGAACGCGATCTCGATCACCTACACTATCTCGATCTCCCTTCTTCTTTCGAGGAAGAACCACAAGGTTCATTTCCATTCGTTAGAAGCTATAGTCAGAAAAAGTCAGTCAAATGCAAGTCTGTGGCAGTCCTTAGAAAACCTTGGATTGAAATTTTGGTTTTCCATGGAACTCAAGCTTTAATGGGAAGAAGTTCGGCTGGAGAGAAATTTCGTTTCCCTATTTTGGTATTCTTTCGAGGAAGAAGTTCGGCTGGCTTTCATGTTGTTGCCTTTTCATATGGAAATACTAATGCTTCCATGGAGATAAAGGATGATGATGCCGAGGATGAACATACTACTGACTTAGTAAAATATCGAGAACTATATCCATTTGGTGTGGATCCTAACTGGCTGGGAAGTCGATCAGAATTTCCTTTTCTAAACTCTCTCAAGATGAAGATGTCCATTCTGTTTGGTGTGTATGAAGGTGCAGCCAATGAGGGTGGTAGAGGACCAAGCATTTGGGATACCTTCACTCACAAATATCCTGGTAGTGTGTGTGAAGACGTTATATTGCTTGGTGTCCATGACAATAGAGCTGCTGCAGCATCCAATTGGTCCGACAAAGGGGGTGCAACAGGTAATGCTGAGAGCATGGGAGATAAGGTTGAGTGGATTAACAAGCTAAGAAATGTTGCACAGGCTAAAGGAGTTCAAGCCATTGGGGAATCGGGTTTTCCTATGCGGCAAAGACAATTAGGTATGAAGCTCTTCAGAGTGAAGCAGGTAAAATTGCTTAGGAGATCAGGAAGAGCTCCTGATGACATCTCAAGTGTTGTACTGGTTGTGAAGCGGTTTGGCACAACCCCGGTTAATTCCGGCAGTTTAGCCAAAACCCCTGGAAATAGGGGCGGTTTTCTAGAAACTGTCTAG 1140 0.4649 MPRFPSSPLWLSVPPRRCRRDGSGGGWVMDLEVVAAFVNSVEALVEWNSLSIDRYDVRHLLSAPLPPRLKRRPPQPERDLDHLHYLDLPSSFEEEPQGSFPFVRSYSQKKSVKCKSVAVLRKPWIEILVFHGTQALMGRSSAGEKFRFPILVFFRGRSSAGFHVVAFSYGNTNASMEIKDDDAEDEHTTDLVKYRELYPFGVDPNWLGSRSEFPFLNSLKMKMSILFGVYEGAANEGGRGPSIWDTFTHKYPGSVCEDVILLGVHDNRAAAASNWSDKGGATGNAESMGDKVEWINKLRNVAQAKGVQAIGESGFPMRQRQLGMKLFRVKQVKLLRRSGRAPDDISSVVLVVKRFGTTPVNSGSLAKTPGNRGGFLETV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02435 379 Pfam Alternative splicing regulator 34 97 IPR019147 -
Vimu11g02435 379 PANTHER SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT 34 188 IPR040397 -
Vimu11g02435 379 Pfam V-type ATPase 116kDa subunit family 182 230 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vimu11g02435 379 SMART DRY_EERY_2 29 173 IPR019147 -
Vimu11g02435 379 SUPERFAMILY (Trans)glycosidases 230 257 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02435 Vimu-Chr11 42751230 42756096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02435 174 229 Primary Pumps ATPases(2) AT2G28520 57.143 1.81e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02435 K02154 - gmx:100791165 100.523