Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02432 ATGCGGTCGAACTTGCCACGTGGCAGTGTAAGCAGGGGGCGAGTACCATCCTTGACGCTGCTGCAACGGAGCAGATCATATCTTCCTTGCGACCATGTCTCTCGCGTTCGGGACCTCGATCCGCGTGAATGTCCAAAGGCGCGTGGTGATGGCGGGGAAGTCAGAAACAGTGTCGATCCGCGTTCCTTACAAGAACCTCCACGACGATTCTTCCGCTCCCGAACTCGAACTCGTAGATGTCGACCACCGCGGCCACCGGATCCACGTCAACTCGCCGCCGTCAATTCACTCGCCTTCGCCGCCAAGCAACAGAGCTTCCTTGGTCAATCTCGTTCTCAGTTGCACCGTAGCCGCCGGCGTCCAATTCGGTTGGGCCTTGCAGCTCTCTCTCTTAACGCCCTACATTCAGGTCCGACGTTGGGAATAGGACATGCTTTTTCTTCTTTTATCTGGCTTTGTGGCCCCATTACAGGCCTTGTGGTTCAACCCTGCGTTGGTGTTTGGAGTGATAAATGTACATCGAGGTTTGGCAGAAGGCGGCCGTTCATTCTGGCAGGATCTCTTATGATATCTGTGGCTGTGATATTAATCGGATTTTCTGCAGACATTGGATATGTATTAGGTGATACACACGAGCATTGCAGAACATTTAAAGGAACCCGAACAAGGGCTGCTCTTGTATTTATTCTTGGGTTCTGGATGCTGGACCTTGCTAACAACACGGTGCAGGGTCCTGCTCGGGCACTTTTGGCTGATCTGTCTGGTCCTGATCAACGTAATGTGGCAAATGCTATATTTTGCTCATGGATGGCAGCTGGGAACATCCTAGGATATTCTTCTGGTGCTAGTGGAAAGTGGAACAAATGGTTCCCTTTCCTGACCACAAGAGCTTGCTGCGAAGCCTGTGGCAATCTTAAGGCAGCATTTCTTGTGGCTGTGGTGTTTCTGGCATTATGCACATTTGTCACTCTATATTTTGCTGATGAGGTTCCACTTACTACTGCAAGTCAACATCATCGCTTGTCAGATTCTTCTCCTTTATTGGACGAACAACAACAAAATGGTGTTGAATTTTCAAAATCAAGGCCAATGGGTGAATCCAATGACCAGAGAACTGAAGATCACATTGGGAAAGAGGCAGAGCTAAATCATAAGAATTTCAAAGCTGGGGAAGATCATACTGAAAATGTAATGGATGGGCCTGGAGCAGTATTGGTAAATTTGTTGACAAGTTTAAGGCATTTGCCTCCTGCTATGCATTCAGTCCTGATTGTAATGGCTCTCACTTGGTTGTCATGGTTTCCCTTCTTTCTGTTTGACACGGATTGGATGGGGAGAGAAGTTTATCATGGTGATCCAAAAGGGGGCACTTCTGAAATAGATCTTTACGATCAAGGTGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCAGTTGTCCTTGGAATTAGCTCTTTCTTCATTGAACCAATGTGTAAGTGGATGGGCACGAAATTGGTATGGGCGCTGAGCAATTTTATTGTCTTTGTCTGCATGGCTGGCACTGCCATCATTAGTCTGATTTCCATTCAAAATCATTCTGGAGGGATAGAACATGTAATTGGAGCAAGTGTAGCAATCAAGATTGCTTCCTTGGTTGTGTTTGTTCTTCTTGGTTTTCCTCTTGCAATTACCTATAGTGTACCCTTTGCTGTCACAGCAGAGTTGACTGCTGATTCAGGGGGTGGCCAAGGATTGGCCATAGGAGTTCTAAATCTTGCAATTGTTGTTCCTCAGATTATTATATCCCTTGGTTGTGGTCCCTGGGATGCTCTCTTTGGTGGTGGAAATATTCCTGCCTTTGTTCTAGCCTCCGTTTGTGCTCTGGCTGGTGGTGTAATTGCAACTCTCAAACTGCCAAATCTATCTAGCAATTTCCAGTCAACAGGATTTCATATGGGCTAG 1944 0.4676 MRSNLPRGSVSRGRVPSLTLLQRSRSYLPCDHVSRVRDLDPRECPKARGDGGEVRNSVDPRSLQEPPRRFFRSRTRTRRCRPPRPPDPRQLAAVNSLAFAAKQQSFLGQSRSQLHRSRRRPIRLGLAALSLNALHSGPTLGIGHAFSSFIWLCGPITGLVVQPCVGVWSDKCTSRFGRRRPFILAGSLMISVAVILIGFSADIGYVLGDTHEHCRTFKGTRTRAALVFILGFWMLDLANNTVQGPARALLADLSGPDQRNVANAIFCSWMAAGNILGYSSGASGKWNKWFPFLTTRACCEACGNLKAAFLVAVVFLALCTFVTLYFADEVPLTTASQHHRLSDSSPLLDEQQQNGVEFSKSRPMGESNDQRTEDHIGKEAELNHKNFKAGEDHTENVMDGPGAVLVNLLTSLRHLPPAMHSVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGGTSEIDLYDQGVREGAFGLLLNSVVLGISSFFIEPMCKWMGTKLVWALSNFIVFVCMAGTAIISLISIQNHSGGIEHVIGASVAIKIASLVVFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVVPQIIISLGCGPWDALFGGGNIPAFVLASVCALAGGVIATLKLPNLSSNFQSTGFHMG 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02432 647 Pfam MFS/sugar transport protein 140 275 - -
Vimu11g02432 647 PANTHER SUGAR TRANSPORTER 139 630 - -
Vimu11g02432 647 FunFam Sucrose transport protein SUT5 420 640 - -
Vimu11g02432 647 MobiDBLite consensus disorder prediction 41 55 - -
Vimu11g02432 647 Gene3D MFS general substrate transporter like domains 117 631 IPR036259 -
Vimu11g02432 647 MobiDBLite consensus disorder prediction 41 68 - -
Vimu11g02432 647 SUPERFAMILY MFS general substrate transporter 139 633 IPR036259 -
Vimu11g02432 647 CDD MFS_SLC45_SUC 139 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02432 Vimu-Chr11 42706996 42712176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02432 195 647 Sucrose Transporter Gene Family AT2G02860 69.757 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02432 K15378 - gmx:100793185 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02432 11 42706996 42712176 Vimu11g02432 11 42706996 42712176 ECH