Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02382 ATGGAATACCTTTTTCAGATTCTTCTTCTAATTACCATAGTGTGTGTGACCATTGATGTACTTGTATCAAGCTTCAAACCAATGAAAACCTCAAAATACGCTCCAGGGCCTCATCCTTTTCCCATCATAGGAAATATCTTGGAGCTTACCTTCAAGAGAAGCAAAACAATGGAATACCTTCTTCCGCTTCTTCTTCAAATCACCATAGTTTGTGTAACCATTCATATACTTGTCTCAAGCTTCAAACCAAAGAAAACCTCAAAGTACCCTCCAGGGCCTCACCCTTTTCCCATCATAGGAAACATCCTGGAGCTTGGAAATCAGCCTCACCAAGCACTTGCCAAACTTTCTCAAATTTATGGTCCTATTATGAGTCTCAAGCTTGGTAGCACTACTACCATAGTCATTTCATCTCCACATGTTGCCAAAGAAGTACTGCAAAAACATGATCAAATCTTTTCCAACAGGACAATCCCAGATACTCTTCGAGCTCTTGATCATCACATACTTTCAGTGGTCTGGATGCCACCTTCAGCACTGTGGAGGACCCTTAGGAGAGCTTGTGCCACCAAAGTGTTTTCTTCTCAGCAGCTTGATTCCACACAAGTTTGTCGACAGAGGAAGGTTCATGAATTGATGGATTATGTTAAGGAAAGATGTCAGAAAGGTGAAGCCCTGGATATTGGTGAGGCTTCCTTCACAACTGTGCTTAATTCCATATCAAACACTTTCTTCTCTATGGATTTAGCTCATTACGCTTCTGACAAGTCTCAAGAGTTCAAGGACATCATTTGGGGCGTCATGGAAGAAGCTGGAAGGCCTAATATTGTTGACTTTTTTCCAGTCTTTCGCATGCTTGATCCACAGGGTGCTCGGAGAAGAATGAATGGTTACTTTGGAAAGTTAATTGCGTTTTTTGATGGACTCATAGAAGAAAGATTGCGTCTAAGGGCATCAGAAAATGAAGCCAAGGTATGCAAGGACGTGTTGGATTCCGTGTTGGAACTCATGCTTGAAGACAATTCACAAGTGACTCGCGCTCATGTTCTGCATTTGTTTGTGGATTTATTTGTGGCTGGAATAGACACGACATCAAGCTCTATAGAATGGGCTATGGCTGAGTTGCTTCGTAACCCAGAAAAGCTAGAAAAAGTGAGGGAAGAGCTTCACCAAGTCCTTGTCAAAGGTGAGCAACTAGAAGAATCACATATCTCAAAGCTTCCTTATCTACAAGCAGTGGTGAAGGAAACTTTCCGCTTGCATCCACCTATCCCAATGTTAGTGCCACACAAGCCAGAAGTTGATGTTGAACTATGTGACTTCATGGTACCTAAAAGTTCCCAAATTCTGGTTAATGTATGGGCCATGGGTAGAGATTCAAGTATTTGGACAAACCCAGATGTATTCAGACCTGAAAGATTCTTGGAAAGTGACCTTGATTTTAAGGGTCAAGATTTTGAACTAATACCCTTTGGAGCAGGAAGAAGGATCTGTCCTGGATTGCCATTGGCTTCCAGAACTGTGCATATTGTATTGGCCTCTCTTCTATGCAAGTATAATTGGAAGCTGAAAGATGGACAAAAGCCACAAGACATGGATATATCTGAGAAATATGGGATTACCTTGCATAAGGCACAACCTCTCCAAGTCATTCCAATCCAAGCATAA 1668 0.4179 MEYLFQILLLITIVCVTIDVLVSSFKPMKTSKYAPGPHPFPIIGNILELTFKRSKTMEYLLPLLLQITIVCVTIHILVSSFKPKKTSKYPPGPHPFPIIGNILELGNQPHQALAKLSQIYGPIMSLKLGSTTTIVISSPHVAKEVLQKHDQIFSNRTIPDTLRALDHHILSVVWMPPSALWRTLRRACATKVFSSQQLDSTQVCRQRKVHELMDYVKERCQKGEALDIGEASFTTVLNSISNTFFSMDLAHYASDKSQEFKDIIWGVMEEAGRPNIVDFFPVFRMLDPQGARRRMNGYFGKLIAFFDGLIEERLRLRASENEAKVCKDVLDSVLELMLEDNSQVTRAHVLHLFVDLFVAGIDTTSSSIEWAMAELLRNPEKLEKVREELHQVLVKGEQLEESHISKLPYLQAVVKETFRLHPPIPMLVPHKPEVDVELCDFMVPKSSQILVNVWAMGRDSSIWTNPDVFRPERFLESDLDFKGQDFELIPFGAGRRICPGLPLASRTVHIVLASLLCKYNWKLKDGQKPQDMDISEKYGITLHKAQPLQVIPIQA 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02382 555 PRINTS P450 superfamily signature 359 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 PRINTS P450 superfamily signature 489 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 PRINTS P450 superfamily signature 498 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 Pfam Cytochrome P450 90 544 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 CDD CYP76-like 117 552 - -
Vimu11g02382 555 Gene3D Cytochrome P450 77 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 PRINTS E-class P450 group I signature 117 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 PRINTS E-class P450 group I signature 452 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 PRINTS E-class P450 group I signature 368 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 PRINTS E-class P450 group I signature 488 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 PRINTS E-class P450 group I signature 411 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 PRINTS E-class P450 group I signature 348 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 PRINTS E-class P450 group I signature 141 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 PRINTS E-class P450 group I signature 498 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g02382 555 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 491 500 IPR017972 GO:0005506|GO:0016705
Vimu11g02382 555 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 69 554 - -
Vimu11g02382 555 FunFam Cytochrome P450 76C4 81 551 - -
Vimu11g02382 555 Coils Coil 382 402 - -
Vimu11g02382 555 SUPERFAMILY Cytochrome P450 90 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02382 Vimu-Chr11 41477275 41479231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02382 63 554 Cytochrome P450 AT2G45550 48.790 5.97e-176 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02382 - - gmx:100809483 887.486