Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02324 ATGGTGCAGCGTCTCACCTACCGCAAGCGCCATAGCTATGCCACAAAATCCAACCAGCACAGGGTCGTTAAGACCCCCGGTAATTTCTCTTCACCAGCTTTGTACAGTCGTTTATCTCAATTACGTTGTGCCGTTTTGCTCGCCAGGGTTCGGTTGAGTTTAACGTGGTGCGGTGGTAAGCTGGTTTACCAGAGCACGAAGAAGAGGGCCAGTGGACCCAAGTGTCCTGTCACTGGAAAGAGGATTCAAGGGATTCCACATTTAAGGCCTACAGAATACAAGAGATCCAGGTTATCCAGAAACCGGAGGACTGTGAACCGGGCATACGGAGGTGTGTTGTCTGGCAGTGCCGTTAGAGAAAGAATTATTCGAGCTTTCTTGGTTGAAGAGCAAAAGATTGTGAAAAAGGTCTTAAAGATCCAAAAGGCAAAGGAAAAGCAGGCATTGAAGAGCTGA 456 0.4825 MVQRLTYRKRHSYATKSNQHRVVKTPGNFSSPALYSRLSQLRCAVLLARVRLSLTWCGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQALKS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02324 151 Gene3D - 1 30 - -
Vimu11g02324 151 Pfam Ribosomal protein L34e 57 127 IPR008195 GO:0003735|GO:0005840|GO:0006412
Vimu11g02324 151 Pfam Ribosomal protein L34e 1 28 IPR008195 GO:0003735|GO:0005840|GO:0006412
Vimu11g02324 151 PANTHER 60S RIBOSOMAL PROTEIN L34 1 147 IPR008195 GO:0003735|GO:0005840|GO:0006412
Vimu11g02324 151 ProSitePatterns Ribosomal protein L34e signature. 15 28 IPR018065 -
Vimu11g02324 151 Gene3D - 70 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02324 Vimu-Chr11 40226065 40227480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02324 1 150 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 74.000 1.20e-70 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02324 K02915 - zju:107415553 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02324 11 40226065 40227480 Vimu11g02324 11 40226065 40227480 ECH