Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02293 ATGATGTATCCATGTCATTTGATTCCGCCAGCATTAGTGATCACTGTTGGTTTGGTTGCAATTGTTGCAATTAAAACTGTTTTGGTTCTAGATGCGGATATAATCAATGGACGGGACTTTGGGATATACTCAAGACTCCAGGATCCAGCCTCTTTGCATAGAACTGTGGCAGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTGGATCTCTTGGATGATGGATATAGGGCTTCAACGGATCCTAAAGCTGTAATAACAACATATGAAGGAAAACATAATCATGATGTACCAGCAGCTAAGACTAATAGTCACACACTTGCCAATAATAGAACACAGCTGAAAGTACAAAATGCCATGCCTGATGAGAAGATGCATAGTTTCAGGGGCAGTGAGCAGCGACCTGTGGCAAGTCTAAGACTAAAGGAAGAGAAGATAACTTAG 444 0.4122 MMYPCHLIPPALVITVGLVAIVAIKTVLVLDADIINGRDFGIYSRLQDPASLHRTVAEPRIIVQTTSEVDLLDDGYRASTDPKAVITTYEGKHNHDVPAAKTNSHTLANNRTQLKVQNAMPDEKMHSFRGSEQRPVASLRLKEEKIT 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02293 147 MobiDBLite consensus disorder prediction 120 147 - -
Vimu11g02293 147 MobiDBLite consensus disorder prediction 125 147 - -
Vimu11g02293 147 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 117 IPR044810 GO:0003700
Vimu11g02293 147 ProSiteProfiles WRKY domain profile. 48 98 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02293 Vimu-Chr11 39826358 39827779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02293 45 147 WRKY Transcription Factor Family AT2G03340 48.921 1.45e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02293 - - vra:106767403 177.563