Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02285 ATGGCTCTTTTTGTGTATCTTGTGCTTTTCCTGGCCCTGACTCGTCGTTCAAGCGCTCTTTACTGCTTATGCAAAGATGGTGTTGGTGATCAAGCCCTGCAGAAAGCAATAGATTATGCTTGTGGAGCCGGAGCTGACTGTACCCCTATTCTCCAAAATGGAGCTTGTTACCAACCCAACACTGTGAAGGATCACTGTAATTATGCAGTTAATAGCTATTACCAGAGAAAGGGTAATGCTCAAGGAACATGTGATTTTGCAGGTGCTGCCACAACCAGTGCAAATCCACCTGCGGCATCATCTGGATGTGTCTACCCCTCGAGTCCTAGGTATGTGTTCTTTGATTATTATGGGAATTTTGAGGCAATCGAGTGTGAGGTTGGAATCTTGATGAAAAACCCTTTCTGCTTGGCATTTTATGGCAATGCAGGAACAACACCATCAACTGGATCACCACCTGGTACAACTCCTGGTACTCCTACCATAGTTGGAATAAGTCCAACATCTACAACTGGTTTGAGTGGCAATGGAGCTAATTTGGGAGGCACCAACTCTGAGTTGCTACTGCTCTTTGTGCTAACCATGTGGTTAGCAATCAGGGTGTAG 606 0.4538 MALFVYLVLFLALTRRSSALYCLCKDGVGDQALQKAIDYACGAGADCTPILQNGACYQPNTVKDHCNYAVNSYYQRKGNAQGTCDFAGAATTSANPPAASSGCVYPSSPRYVFFDYYGNFEAIECEVGILMKNPFCLAFYGNAGTTPSTGSPPGTTPGTPTIVGISPTSTTGLSGNGANLGGTNSELLLLFVLTMWLAIRV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02285 201 PANTHER BETA-1,3 GLUCANASE 9 140 IPR044788 -
Vimu11g02285 201 Pfam X8 domain 21 91 IPR012946 -
Vimu11g02285 201 FunFam Glucan endo-1,3-beta-glucosidase 4 15 109 - -
Vimu11g02285 201 Gene3D - 15 108 - -
Vimu11g02285 201 SMART X8_cls 20 105 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02285 Vimu-Chr11 39673516 39675117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02285 21 98 Glycoside Hydrolase AT2G01630 44.304 8.62e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02285 - - gmx:100811705 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02285 11 39673516 39675117 Vimu11g02285 11 39673516 39675117 ECH
Vimu11g02285 11 39673516 39675117 Vimu7g00193 7 2370487 2371879 PCT